RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 ITGA7Q13683 1181 aa26.92■■□□□ 1.9
LSM7-203ENST00000585409 RAB30Q15771 203 aa26.92■■□□□ 1.9
LSM7-203ENST00000585409 FSCN1Q16658 493 aaKnown RBP26.92■■□□□ 1.9
LSM7-203ENST00000585409 ASPRV1Q53RT3 343 aa26.92■■□□□ 1.9
LSM7-203ENST00000585409 SYNE3Q6ZMZ3 975 aa26.92■■□□□ 1.9
LSM7-203ENST00000585409 NOL8Q76FK4 1167 aaKnown RBP26.92■■□□□ 1.9
LSM7-203ENST00000585409 IGDCC4Q8TDY8 1250 aa26.92■■□□□ 1.9
LSM7-203ENST00000585409 ATXN2LQ8WWM7 1075 aaKnown RBP26.92■■□□□ 1.9
LSM7-203ENST00000585409 TRERF1Q96PN7 1200 aa26.92■■□□□ 1.9
LSM7-203ENST00000585409 SEZ6LQ9BYH1 1024 aa26.92■■□□□ 1.9
LSM7-203ENST00000585409 HIPK3Q9H422 1215 aa26.92■■□□□ 1.9
LSM7-203ENST00000585409 UMODL1Q5DID0 1318 aa26.91■■□□□ 1.9
LSM7-203ENST00000585409 TNFRSF10AO00220 468 aa26.91■■□□□ 1.9
LSM7-203ENST00000585409 SH2B2O14492 632 aaPredicted RBP26.91■■□□□ 1.9
LSM7-203ENST00000585409 ADGRE1Q14246 886 aa26.91■■□□□ 1.9
LSM7-203ENST00000585409 ADCK5Q3MIX3 580 aa26.91■■□□□ 1.9
LSM7-203ENST00000585409 TM6SF1Q9BZW5 370 aa26.91■■□□□ 1.9
LSM7-203ENST00000585409 MSRAQ9UJ68 235 aa26.91■■□□□ 1.9
LSM7-203ENST00000585409 Q9Y3F1 56 aa26.91■■□□□ 1.9
LSM7-203ENST00000585409 FGBP02675 491 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 PARP1P09874 1014 aaKnown RBP26.9■■□□□ 1.9
LSM7-203ENST00000585409 SNHG28P0DPA3 235 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 ALAS1P13196 640 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 PTGS1P23219 599 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 ZNF543Q08ER8 600 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 IQSEC1Q6DN90 963 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 TAPT1Q6NXT6 567 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 KCTD1Q719H9 257 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 NOC4LQ9BVI4 516 aaKnown RBP26.9■■□□□ 1.9
LSM7-203ENST00000585409 AP5M1Q9H0R1 490 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 MTIF3Q9H2K0 278 aaKnown RBP26.9■■□□□ 1.9
LSM7-203ENST00000585409 CYP39A1Q9NYL5 469 aa26.9■■□□□ 1.9
LSM7-203ENST00000585409 DYNC1LI2O43237 492 aaPredicted RBP26.89■■□□□ 1.9
LSM7-203ENST00000585409 CALM1P0DP23 149 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 CALM2P0DP24 149 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 CALM3P0DP25 149 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 CASTP20810 708 aaKnown RBP26.89■■□□□ 1.9
LSM7-203ENST00000585409 MUM1L1Q5H9M0 696 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 PPM1EQ8WY54 764 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 LY9Q9HBG7 655 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 PDGFCQ9NRA1 345 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 PNMA2Q9UL42 364 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 CYP46A1Q9Y6A2 500 aa26.89■■□□□ 1.9
LSM7-203ENST00000585409 DDX49Q9Y6V7 483 aaKnown RBP26.89■■□□□ 1.9
LSM7-203ENST00000585409 ZEB2O60315 1214 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 B4GALT4O60513 344 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 DDAH1O94760 285 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 EXOSC10Q01780 885 aaKnown RBP26.88■■□□□ 1.89
LSM7-203ENST00000585409 MORC4Q8TE76 937 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 TRPV6Q9H1D0 765 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 WNT8AQ9H1J5 351 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 NKX2-4Q9H2Z4 354 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 THEGQ9P2T0 379 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 PRR12Q9ULL5 1215 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 YBX2Q9Y2T7 364 aaKnown RBP26.88■■□□□ 1.89
LSM7-203ENST00000585409 SLC12A7Q9Y666 1083 aa26.88■■□□□ 1.89
LSM7-203ENST00000585409 RPS6KB1P23443 525 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 KIF5BP33176 963 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 TMEM63BQ5T3F8 832 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 BTNL9Q6UXG8 535 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 FBXO16Q8IX29 292 aaPredicted RBP26.87■■□□□ 1.89
LSM7-203ENST00000585409 CTCFLQ8NI51 663 aaPredicted RBP26.87■■□□□ 1.89
LSM7-203ENST00000585409 CHMP4CQ96CF2 233 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 VWCEQ96DN2 955 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 ASB2Q96Q27 587 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 MAP3K14Q99558 947 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 GPCPD1Q9NPB8 672 aa26.87■■□□□ 1.89
LSM7-203ENST00000585409 FRMPD2Q68DX3 1309 aaPredicted RBP26.87■■□□□ 1.89
LSM7-203ENST00000585409 NCOR1O75376 2440 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 CCL23P55773 120 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 SNAP25P60880 206 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 SYDE2Q5VT97 1194 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 RUFY3Q7L099 469 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 OTOP2Q7RTS6 562 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 SGMS1Q86VZ5 419 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 ZNF654Q8IZM8 581 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 SLC28A3Q9HAS3 691 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 VTA1Q9NP79 307 aa26.86■■□□□ 1.89
LSM7-203ENST00000585409 PSMC6P62333 389 aa26.85■■□□□ 1.89
LSM7-203ENST00000585409 EEPD1Q7L9B9 569 aa26.85■■□□□ 1.89
LSM7-203ENST00000585409 RASGRP2Q7LDG7 609 aa26.85■■□□□ 1.89
LSM7-203ENST00000585409 ZSWIM6Q9HCJ5 1215 aa26.85■■□□□ 1.89
LSM7-203ENST00000585409 REV3LO60673 3130 aa26.85■■□□□ 1.89
LSM7-203ENST00000585409 SEC24BO95487 1268 aa26.84■■□□□ 1.89
LSM7-203ENST00000585409 GNAQP50148 359 aa26.84■■□□□ 1.89
LSM7-203ENST00000585409 GRM4Q14833 912 aa26.84■■□□□ 1.89
LSM7-203ENST00000585409 LRRC2Q9BYS8 371 aa26.84■■□□□ 1.89
LSM7-203ENST00000585409 ICAM1P05362 532 aa26.83■■□□□ 1.89
LSM7-203ENST00000585409 FBXL16Q8N461 479 aa26.83■■□□□ 1.89
LSM7-203ENST00000585409 PURBQ96QR8 312 aaKnown RBP26.83■■□□□ 1.89
LSM7-203ENST00000585409 ALDH8A1Q9H2A2 487 aaPredicted RBP26.83■■□□□ 1.89
LSM7-203ENST00000585409 CCPG1Q9ULG6 757 aa26.83■■□□□ 1.89
LSM7-203ENST00000585409 SCN5AQ14524 2016 aa26.82■■□□□ 1.88
LSM7-203ENST00000585409 DHX16O60231 1041 aaKnown RBP26.82■■□□□ 1.88
LSM7-203ENST00000585409 IGFBP4P22692 258 aa26.82■■□□□ 1.88
LSM7-203ENST00000585409 MRPS5P82675 430 aaKnown RBP26.82■■□□□ 1.88
LSM7-203ENST00000585409 TROAPQ12815 778 aa26.82■■□□□ 1.88
LSM7-203ENST00000585409 CCDC85BQ15834 202 aaPredicted RBP26.82■■□□□ 1.88
LSM7-203ENST00000585409 DUSP28Q4G0W2 176 aa26.82■■□□□ 1.88
LSM7-203ENST00000585409 NSMFQ6X4W1 530 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms