RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 MAF1Q9H063 256 aa26.69■■□□□ 1.86
LSM7-202ENST00000585395 ATN1P54259 1190 aaPredicted RBP26.68■■□□□ 1.86
LSM7-202ENST00000585395 RABEP1Q15276 862 aa26.68■■□□□ 1.86
LSM7-202ENST00000585395 CPLX2Q6PUV4 134 aaKnown RBP26.68■■□□□ 1.86
LSM7-202ENST00000585395 HOMER1Q86YM7 354 aa26.68■■□□□ 1.86
LSM7-202ENST00000585395 LENG1Q96BZ8 264 aaPredicted RBP26.68■■□□□ 1.86
LSM7-202ENST00000585395 MTMR8Q96EF0 704 aa26.68■■□□□ 1.86
LSM7-202ENST00000585395 SPC25Q9HBM1 224 aa26.68■■□□□ 1.86
LSM7-202ENST00000585395 NID2Q14112 1375 aa26.68■■□□□ 1.86
LSM7-202ENST00000585395 PNMA6FA0A0J9YX94 578 aa26.67■■□□□ 1.86
LSM7-202ENST00000585395 PGK1P00558 417 aa26.67■■□□□ 1.86
LSM7-202ENST00000585395 RTP1P59025 263 aa26.67■■□□□ 1.86
LSM7-202ENST00000585395 LRRC41Q15345 812 aa26.67■■□□□ 1.86
LSM7-202ENST00000585395 SLC30A10Q6XR72 485 aa26.67■■□□□ 1.86
LSM7-202ENST00000585395 MRPL11Q9Y3B7 192 aaKnown RBP26.67■■□□□ 1.86
LSM7-202ENST00000585395 B4DLN1 442 aa26.66■■□□□ 1.86
LSM7-202ENST00000585395 MRPL12P52815 198 aaKnown RBP26.66■■□□□ 1.86
LSM7-202ENST00000585395 SMAD3P84022 425 aaKnown RBP26.66■■□□□ 1.86
LSM7-202ENST00000585395 SHHQ15465 462 aa26.66■■□□□ 1.86
LSM7-202ENST00000585395 CCDC144BQ3MJ40 725 aa26.66■■□□□ 1.86
LSM7-202ENST00000585395 EEPD1Q7L9B9 569 aa26.66■■□□□ 1.86
LSM7-202ENST00000585395 CLEC4DQ8WXI8 215 aa26.66■■□□□ 1.86
LSM7-202ENST00000585395 PIGSQ96S52 555 aa26.66■■□□□ 1.86
LSM7-202ENST00000585395 PLEKHA8P1O95397 391 aa26.65■■□□□ 1.86
LSM7-202ENST00000585395 PDIA3P30101 505 aaKnown RBP26.65■■□□□ 1.86
LSM7-202ENST00000585395 ALDH5A1P51649 535 aaPredicted RBP26.65■■□□□ 1.86
LSM7-202ENST00000585395 RPS6P62753 249 aaKnown RBP26.65■■□□□ 1.86
LSM7-202ENST00000585395 MCF2L2Q86YR7 1114 aa26.65■■□□□ 1.86
LSM7-202ENST00000585395 SRBD1Q8N5C6 995 aaKnown RBP26.65■■□□□ 1.86
LSM7-202ENST00000585395 TBC1D32Q96NH3 1257 aa26.65■■□□□ 1.86
LSM7-202ENST00000585395 PURBQ96QR8 312 aaKnown RBP26.65■■□□□ 1.86
LSM7-202ENST00000585395 LCTP09848 1927 aa26.65■■□□□ 1.86
LSM7-202ENST00000585395 CPLX1O14810 134 aa26.64■■□□□ 1.86
LSM7-202ENST00000585395 CYTH3O43739 400 aa26.64■■□□□ 1.86
LSM7-202ENST00000585395 ST18O60284 1047 aa26.64■■□□□ 1.86
LSM7-202ENST00000585395 AK2P54819 239 aa26.64■■□□□ 1.86
LSM7-202ENST00000585395 AKAP17AQ02040 695 aaKnown RBP26.64■■□□□ 1.86
LSM7-202ENST00000585395 MYLIPQ8WY64 445 aa26.64■■□□□ 1.86
LSM7-202ENST00000585395 FERMT2Q96AC1 680 aa26.64■■□□□ 1.86
LSM7-202ENST00000585395 PCDHA1Q9Y5I3 950 aa26.64■■□□□ 1.86
LSM7-202ENST00000585395 SYNRGQ9UMZ2 1314 aa26.64■■□□□ 1.85
LSM7-202ENST00000585395 DUSP11O75319 330 aaKnown RBP26.63■■□□□ 1.85
LSM7-202ENST00000585395 C6orf222P0C671 652 aaPredicted RBP26.63■■□□□ 1.85
LSM7-202ENST00000585395 ADCYAP1R1P41586 468 aa26.63■■□□□ 1.85
LSM7-202ENST00000585395 PDE4DQ08499 809 aa26.63■■□□□ 1.85
LSM7-202ENST00000585395 FBXO16Q8IX29 292 aaPredicted RBP26.63■■□□□ 1.85
LSM7-202ENST00000585395 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
LSM7-202ENST00000585395 ATP11BQ9Y2G3 1177 aa26.63■■□□□ 1.85
LSM7-202ENST00000585395 CDH23Q9H251 3354 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 TNFAIP2Q03169 654 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 C9orf50Q5SZB4 431 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 CCDC82Q8N4S0 544 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 SAMD3Q8N6K7 520 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 RGS22Q8NE09 1264 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 PIBF1Q8WXW3 757 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 TTYH1Q9H313 450 aaPredicted RBP26.62■■□□□ 1.85
LSM7-202ENST00000585395 VTA1Q9NP79 307 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 DDX49Q9Y6V7 483 aaKnown RBP26.62■■□□□ 1.85
LSM7-202ENST00000585395 BAZ2BQ9UIF8 2168 aaKnown RBP26.62■■□□□ 1.85
LSM7-202ENST00000585395 LRRC37A2A6NM11 1700 aa26.62■■□□□ 1.85
LSM7-202ENST00000585395 LOC102724159A0A0B4J2E5 919 aa26.61■■□□□ 1.85
LSM7-202ENST00000585395 hCG_1984214I3L0E3 225 aa26.61■■□□□ 1.85
LSM7-202ENST00000585395 CDKL5O76039 1030 aa26.61■■□□□ 1.85
LSM7-202ENST00000585395 FOSL2P15408 326 aa26.61■■□□□ 1.85
LSM7-202ENST00000585395 PWP2Q15269 919 aaKnown RBP26.61■■□□□ 1.85
LSM7-202ENST00000585395 ZNF713Q8N859 430 aaPredicted RBP26.61■■□□□ 1.85
LSM7-202ENST00000585395 ASTN1O14525 1302 aa26.61■■□□□ 1.85
LSM7-202ENST00000585395 TMEM265A0A087WTH1 108 aa26.6■■□□□ 1.85
LSM7-202ENST00000585395 CFBP00751 764 aa26.6■■□□□ 1.85
LSM7-202ENST00000585395 CDC27P30260 824 aa26.6■■□□□ 1.85
LSM7-202ENST00000585395 ADD1P35611 737 aaKnown RBP26.6■■□□□ 1.85
LSM7-202ENST00000585395 CCT2P78371 535 aaKnown RBP26.6■■□□□ 1.85
LSM7-202ENST00000585395 SLC39A5Q6ZMH5 540 aa26.6■■□□□ 1.85
LSM7-202ENST00000585395 TRIM22Q8IYM9 498 aa26.6■■□□□ 1.85
LSM7-202ENST00000585395 CMTR1Q8N1G2 835 aaKnown RBP26.6■■□□□ 1.85
LSM7-202ENST00000585395 DNERQ8NFT8 737 aa26.6■■□□□ 1.85
LSM7-202ENST00000585395 AP5M1Q9H0R1 490 aa26.6■■□□□ 1.85
LSM7-202ENST00000585395 MAP3K20Q9NYL2 800 aaKnown RBP26.6■■□□□ 1.85
LSM7-202ENST00000585395 CNTNAP5Q8WYK1 1306 aa26.6■■□□□ 1.85
LSM7-202ENST00000585395 SLC35G1Q2M3R5 365 aa26.59■■□□□ 1.85
LSM7-202ENST00000585395 PCSK9Q8NBP7 692 aaKnown RBP26.59■■□□□ 1.85
LSM7-202ENST00000585395 BADQ92934 168 aa26.59■■□□□ 1.85
LSM7-202ENST00000585395 VTI1AQ96AJ9 217 aa26.59■■□□□ 1.85
LSM7-202ENST00000585395 KIF2CQ99661 725 aa26.59■■□□□ 1.85
LSM7-202ENST00000585395 KATNBL1Q9H079 304 aa26.59■■□□□ 1.85
LSM7-202ENST00000585395 PRDM5Q9NQX1 630 aaPredicted RBP26.59■■□□□ 1.85
LSM7-202ENST00000585395 FAM217BQ9NTX9 383 aaPredicted RBP26.59■■□□□ 1.85
LSM7-202ENST00000585395 PHF24Q9UPV7 400 aa26.59■■□□□ 1.85
LSM7-202ENST00000585395 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.58■■□□□ 1.85
LSM7-202ENST00000585395 PFKFB2O60825 505 aa26.58■■□□□ 1.85
LSM7-202ENST00000585395 ADAMTS4O75173 837 aa26.58■■□□□ 1.85
LSM7-202ENST00000585395 IFNAR1P17181 557 aa26.58■■□□□ 1.85
LSM7-202ENST00000585395 STK3Q13188 491 aa26.58■■□□□ 1.85
LSM7-202ENST00000585395 SNX17Q15036 470 aa26.58■■□□□ 1.85
LSM7-202ENST00000585395 IQSEC1Q6DN90 963 aa26.58■■□□□ 1.85
LSM7-202ENST00000585395 ZSCAN31Q96LW9 406 aaPredicted RBP26.58■■□□□ 1.85
LSM7-202ENST00000585395 TSEN34Q9BSV6 310 aaKnown RBP26.58■■□□□ 1.85
LSM7-202ENST00000585395 TPCN1Q9ULQ1 816 aa26.58■■□□□ 1.85
LSM7-202ENST00000585395 LIMCH1Q9UPQ0 1083 aa26.58■■□□□ 1.85
LSM7-202ENST00000585395 MUC3AQ02505 3323 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms