RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 PPP1R2P41236 205 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 ZNF75DP51815 510 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 ARHGAP4P98171 946 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 USP17L24Q0WX57 530 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 KCNB1Q14721 858 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 KIAA1755Q5JYT7 1200 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 NBPF12Q5TAG4 269 aaPredicted RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 USP17L6PQ6QN14 398 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 TRPM4Q8TD43 1214 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 FAM20AQ96MK3 541 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 NT5C3AQ9H0P0 336 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 KCNMB3Q9NPA1 279 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 GCOM1H8Y6P7 765 aaPredicted RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 FOXN1O15353 648 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 SLC37A4O43826 429 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 EDIL3O43854 480 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 POLR2MP0CAP2 368 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 MSNP26038 577 aaKnown RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 BACE1P56817 501 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 NCAPHQ15003 741 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 KARSQ15046 597 aaKnown RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 USH1GQ495M9 461 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 NAALADL2Q58DX5 795 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 KRT79Q5XKE5 535 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 MCF2L2Q86YR7 1114 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 CCDC47Q96A33 483 aaKnown RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 KIFC2Q96AC6 838 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 KLRG1Q96E93 195 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 KIF12Q96FN5 646 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 WRNIP1Q96S55 665 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 TTC12Q9H892 705 aaPredicted RBP11.51□□□□□ -0.57
IFT20-213ENST00000583796 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 LRWD1Q9UFC0 647 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 ZKSCAN5Q9Y2L8 839 aa11.51□□□□□ -0.57
IFT20-213ENST00000583796 ASTN2O75129 1339 aaPredicted RBP11.5□□□□□ -0.57
IFT20-213ENST00000583796 OPLAHO14841 1288 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 AP5Z1O43299 807 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 CBFA2T2O43439 604 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 VCAM1P19320 739 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 BMP6P22004 513 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 TECP42680 631 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 TXKP42681 527 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 AFMP43652 599 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 OAZ1P54368 228 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 HYIQ5T013 277 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 HAUS3Q68CZ6 603 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 CNNM4Q6P4Q7 775 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 ZNF280CQ8ND82 737 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 RBM46Q8TBY0 533 aaKnown RBP11.5□□□□□ -0.57
IFT20-213ENST00000583796 ZC3H15Q8WU90 426 aaKnown RBP11.5□□□□□ -0.57
IFT20-213ENST00000583796 CDK5RAP3Q96JB5 506 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 GLIS2Q9BZE0 524 aaPredicted RBP11.5□□□□□ -0.57
IFT20-213ENST00000583796 SLC38A10Q9HBR0 1119 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 PPP1R9AQ9ULJ8 1098 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 PCDHA12Q9UN75 941 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 MYPNQ86TC9 1320 aa11.5□□□□□ -0.57
IFT20-213ENST00000583796 PAPPA2Q9BXP8 1791 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 PARP14Q460N5 1801 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 SSC5DA1L4H1 1573 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 MARCH6O60337 910 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 PTPRAP18433 802 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 PLCG1P19174 1290 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 INPP5BP32019 993 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 EPS15P42566 896 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 SETQ01105 290 aaPredicted RBP11.49□□□□□ -0.57
IFT20-213ENST00000583796 ZNF658Q5TYW1 1059 aaPredicted RBP11.49□□□□□ -0.57
IFT20-213ENST00000583796 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 LDHDQ86WU2 507 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 ERMNQ8TAM6 284 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 HAS1Q92839 578 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 MMTAG2Q9BU76 263 aaKnown RBP11.49□□□□□ -0.57
IFT20-213ENST00000583796 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
IFT20-213ENST00000583796 RHOBTB3O94955 611 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 RPN1P04843 607 aaKnown RBP11.48□□□□□ -0.57
IFT20-213ENST00000583796 HSD17B4P51659 736 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 HIRAP54198 1017 aaPredicted RBP11.48□□□□□ -0.57
IFT20-213ENST00000583796 MTMR2Q13614 643 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 ZYXQ15942 572 aaKnown RBP11.48□□□□□ -0.57
IFT20-213ENST00000583796 COBLL1Q53SF7 1204 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 ASTLQ6HA08 431 aaPredicted RBP11.48□□□□□ -0.57
IFT20-213ENST00000583796 USP50Q70EL3 339 aaPredicted RBP11.48□□□□□ -0.57
IFT20-213ENST00000583796 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 GRAMD1CQ8IYS0 662 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.573e-8■■■□□ 15.3
IFT20-213ENST00000583796 ETNPPLQ8TBG4 499 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 DCPSQ96C86 337 aaKnown RBP11.48□□□□□ -0.57
IFT20-213ENST00000583796 MTRQ99707 1265 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 C7orf25Q9BPX7 421 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 IMPACTQ9P2X3 320 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
IFT20-213ENST00000583796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.47□□□□□ -0.57
IFT20-213ENST00000583796 PVALEFA0A1B0GWK0 134 aa11.47□□□□□ -0.57
IFT20-213ENST00000583796 PP2D1A8MPX8 630 aa11.47□□□□□ -0.57
IFT20-213ENST00000583796 ATP2A1O14983 1001 aa11.47□□□□□ -0.57
IFT20-213ENST00000583796 PPP1R12BO60237 982 aaPredicted RBP11.47□□□□□ -0.57
IFT20-213ENST00000583796 ZBED4O75132 1171 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms