RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SPRED2Q7Z698 418 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 CEP95Q96GE4 821 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 GMCL1Q96IK5 515 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 MUTYHQ9UIF7 546 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 ZBED9Q6R2W3 1325 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 RBM47A0AV96 593 aaKnown RBP13.2□□□□□ -0.3
CASC3-208ENST00000583649 H3BNC9 293 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 ALDH5A1P51649 535 aaPredicted RBP13.2□□□□□ -0.3
CASC3-208ENST00000583649 PDE4BQ07343 736 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 SMAD2Q15796 467 aaKnown RBP13.2□□□□□ -0.3
CASC3-208ENST00000583649 EPC2Q52LR7 807 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 TCEAL5Q5H9L2 206 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 TMCO2Q7Z6W1 182 aaPredicted RBP13.2□□□□□ -0.3
CASC3-208ENST00000583649 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 RNF135Q8IUD6 432 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 C7orf31Q8N865 590 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 ATOH1Q92858 354 aaPredicted RBP13.2□□□□□ -0.3
CASC3-208ENST00000583649 PPP2R3CQ969Q6 453 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 KIF1BPQ96EK5 621 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 YME1L1Q96TA2 773 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 C17orf80Q9BSJ5 609 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 IL1RAPL2Q9NP60 686 aa13.2□□□□□ -0.3
CASC3-208ENST00000583649 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 PTPDC1A2A3K4 754 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 M0R296 226 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 CKBP12277 381 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 CASTP20810 708 aaKnown RBP13.19□□□□□ -0.3
CASC3-208ENST00000583649 PTGS1P23219 599 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 RBL2Q08999 1139 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 TRIM67Q6ZTA4 783 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 MYOCDQ8IZQ8 938 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 RHPN1Q8TCX5 695 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 PHOX2BQ99453 314 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 EXOC6BQ9Y2D4 811 aa13.19□□□□□ -0.3
CASC3-208ENST00000583649 SCN5AQ14524 2016 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 STXBP3O00186 592 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 LGR5O75473 907 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 ICAM1P05362 532 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 TXNP10599 105 aaKnown RBP13.18□□□□□ -0.3
CASC3-208ENST00000583649 GNAT2P19087 354 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 TDO2P48775 406 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 NUBP1P53384 320 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
CASC3-208ENST00000583649 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
CASC3-208ENST00000583649 FBXL6Q8N531 539 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
CASC3-208ENST00000583649 IGKV6D-41A0A0C4DH26 115 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 APPP05067 770 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 PTK7Q13308 1070 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 TMEM63BQ5T3F8 832 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 RCSD1Q6JBY9 416 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 RPAINQ86UA6 219 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 TMEM192Q8IY95 271 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 DNERQ8NFT8 737 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 BOLA2Q9H3K6 86 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 SIP14410 1827 aa13.17□□□□□ -0.3
CASC3-208ENST00000583649 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
CASC3-208ENST00000583649 NBNO60934 754 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 HMMRO75330 724 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 RB1P06400 928 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 ATP5JP18859 108 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 MCCP23508 829 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 CALML3P27482 149 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 HTRA4P83105 476 aaPredicted RBP13.16□□□□□ -0.3
CASC3-208ENST00000583649 DGKDQ16760 1214 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 IER5LQ5T953 404 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 GDF6Q6KF10 455 aaPredicted RBP13.16□□□□□ -0.3
CASC3-208ENST00000583649 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
CASC3-208ENST00000583649 C11orf84Q9BUA3 381 aaPredicted RBP13.16□□□□□ -0.3
CASC3-208ENST00000583649 GTF2IRD1Q9UHL9 959 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 CD207Q9UJ71 328 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 PRR12Q9ULL5 1215 aa13.16□□□□□ -0.3
CASC3-208ENST00000583649 WDFY4Q6ZS81 3184 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 MBTPS2O43462 519 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 GH1P01241 217 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 TCF15Q12870 199 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 CEP85Q6P2H3 762 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
CASC3-208ENST00000583649 NEDD1Q8NHV4 660 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 SEPT8Q92599 483 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 STRBPQ96SI9 672 aaKnown RBP13.15□□□□□ -0.3
CASC3-208ENST00000583649 HAUS7Q99871 368 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
CASC3-208ENST00000583649 DDX49Q9Y6V7 483 aaKnown RBP13.15□□□□□ -0.3
CASC3-208ENST00000583649 BRWD1Q9NSI6 2320 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms