RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 PNMA1Q8ND90 353 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 KIF9Q9HAQ2 790 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 ESYT3A0FGR9 886 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 MOCS3O95396 460 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 CRYMQ14894 314 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 TXNRD1Q16881 649 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 ANKRD40Q6AI12 368 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 NFRKBQ6P4R8 1299 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 CNOT6LQ96LI5 555 aaKnown RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 MMRN2Q9H8L6 949 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 NHEJ1Q9H9Q4 299 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 DMGDHQ9UI17 866 aaKnown RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 ZNF263O14978 683 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 FAM182BQ5T319 152 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 AP1ARQ63HQ0 302 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 ADSSL1Q8N142 457 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 UBA5Q9GZZ9 404 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 TBC1D7Q9P0N9 293 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 MINPP1Q9UNW1 487 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 GOLGA6L7A0A1B0GV03 622 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 EME2A4GXA9 379 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 ZSCAN5CA6NGD5 496 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 RASSF10A6NK89 507 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 ENO4A6NNW6 628 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 LGALS16A8MUM7 142 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 CYTH3O43739 400 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 CCNT1O60563 726 aaKnown RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 IRX1P78414 480 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 PFKFB3Q16875 520 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 MAPKAPK5Q8IW41 473 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 NSUN4Q96CB9 384 aaKnown RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 SPDL1Q96EA4 605 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 NLRC4Q9NPP4 1024 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 IL17RBQ9NRM6 502 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 SRP68Q9UHB9 627 aaKnown RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 LRP6O75581 1613 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 LOC102724428A0A0B4J2F2 783 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 MPHOSPH10O00566 681 aaKnown RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 KRT14P02533 472 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 SLURP2P0DP57 97 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 SIK1P57059 783 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 CACNB1Q02641 598 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 CCNI2Q6ZMN8 369 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 PTF1AQ7RTS3 328 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 TRAPPC11Q7Z392 1133 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 MKNK2Q9HBH9 465 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 TMEM260Q9NX78 707 aa11.64□□□□□ -0.55
TOP3A-214ENST00000582981 PACSIN2Q9UNF0 486 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-214ENST00000582981 UBR2Q8IWV8 1755 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 EP400Q96L91 3159 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-214ENST00000582981 KIF3CO14782 793 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 PSMA7O14818 248 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 IPO7O95373 1038 aaKnown RBP11.63□□□□□ -0.55
TOP3A-214ENST00000582981 TXKP42681 527 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 NBPF20Q3BBV1 942 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 CCDC70Q6NSX1 233 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 USP17L2Q6R6M4 530 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 CCDC121Q6ZUS5 278 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 PARP9Q8IXQ6 854 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 ELOA2Q8IYF1 753 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-214ENST00000582981 MS4A14Q96JA4 679 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 DUSP9Q99956 384 aaKnown RBP11.63□□□□□ -0.55
TOP3A-214ENST00000582981 TANGO6Q9C0B7 1094 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 BIN2Q9UBW5 565 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-214ENST00000582981 E7EVH7 732 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 KLRC4O43908 158 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 RAD21O60216 631 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 OPA1O60313 960 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 CDC25CP30307 473 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 SMTNP53814 917 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 SPAG1Q07617 926 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 SF3A3Q12874 501 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■■■■□ 21.4
TOP3A-214ENST00000582981 DZIP1Q86YF9 867 aaKnown RBP11.63□□□□□ -0.55
TOP3A-214ENST00000582981 PPANQ9NQ55 473 aaKnown RBP11.63□□□□□ -0.55
TOP3A-214ENST00000582981 SPATS2LQ9NUQ6 558 aaKnown RBP11.63□□□□□ -0.55
TOP3A-214ENST00000582981 HAUS2Q9NVX0 235 aa11.63□□□□□ -0.55
TOP3A-214ENST00000582981 BCL9O00512 1426 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 STRCP1A6NGW2 1772 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 GOLGA8KD6RF30 607 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 AP1G2O75843 785 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 HDLBPQ00341 1268 aaKnown RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 C4orf32Q8N8J7 132 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 TGFBRAP1Q8WUH2 860 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 ZBTB10Q96DT7 871 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 LRRC1Q9BTT6 524 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 VCPKMTQ9H867 229 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 CICQ96RK0 1608 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 NUP98P52948 1817 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 ERVV-1B6SEH8 477 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 HSF2BPO75031 334 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 HPDP32754 393 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 NNTQ13423 1086 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms