RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CTNND2Q9UQB3 1225 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 DOCK1Q14185 1865 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 USP11P51784 963 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 RRP1BQ14684 758 aaKnown RBP25.46■■□□□ 1.67
CCDC47-204ENST00000582252 SUPT20HL1Q3ZLR7 823 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 CCDC112Q8NEF3 446 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 ZBTB21Q9ULJ3 1066 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 SLC37A4O43826 429 aa25.45■■□□□ 1.66
CCDC47-204ENST00000582252 MARCH6O60337 910 aa25.45■■□□□ 1.66
CCDC47-204ENST00000582252 CAP2P40123 477 aa25.45■■□□□ 1.66
CCDC47-204ENST00000582252 PPP1R2P41236 205 aa25.45■■□□□ 1.66
CCDC47-204ENST00000582252 SPAG1Q07617 926 aa25.45■■□□□ 1.66
CCDC47-204ENST00000582252 ARID5BQ14865 1188 aa25.45■■□□□ 1.66
CCDC47-204ENST00000582252 FILIP1LQ4L180 1135 aa25.45■■□□□ 1.66
CCDC47-204ENST00000582252 SAMSN1Q9NSI8 373 aaKnown RBP25.45■■□□□ 1.66
CCDC47-204ENST00000582252 TMX2Q9Y320 296 aa25.45■■□□□ 1.66
CCDC47-204ENST00000582252 KCNJ6P48051 423 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 KRT79Q5XKE5 535 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 MOXD1Q6UVY6 613 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 ANKRD20A12PQ8NF67 263 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 PRIMPOLQ96LW4 560 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 MED15Q96RN5 788 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 ZNF341Q9BYN7 854 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 LRRC27Q9C0I9 530 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 GINM1Q9NU53 330 aa25.44■■□□□ 1.66
CCDC47-204ENST00000582252 PHF20L1A8MW92 1017 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 POTECB2RU33 542 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 RHOBTB3O94955 611 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 FOSP01100 380 aaPredicted RBP25.43■■□□□ 1.66
CCDC47-204ENST00000582252 ASNSP08243 561 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 STAT2P52630 851 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 STX17P56962 302 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 JAG1P78504 1218 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 CDKAL1Q5VV42 579 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 SMYD4Q8IYR2 804 aaPredicted RBP25.43■■□□□ 1.66
CCDC47-204ENST00000582252 C7orf25Q9BPX7 421 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 ANO3Q9BYT9 981 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 SLC26A4O43511 780 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 HOXA7P31268 230 aaPredicted RBP25.43■■□□□ 1.66
CCDC47-204ENST00000582252 PLIN2Q99541 437 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 NUP88Q99567 741 aaPredicted RBP25.43■■□□□ 1.66
CCDC47-204ENST00000582252 KCND1Q9NSA2 647 aa25.43■■□□□ 1.66
CCDC47-204ENST00000582252 A0A1B0GTH6 734 aa25.42■■□□□ 1.66
CCDC47-204ENST00000582252 KMT5BQ4FZB7 885 aa25.42■■□□□ 1.66
CCDC47-204ENST00000582252 ARMCX5Q6P1M9 558 aa25.42■■□□□ 1.66
CCDC47-204ENST00000582252 KRT26Q7Z3Y9 468 aa25.42■■□□□ 1.66
CCDC47-204ENST00000582252 NELFBQ8WX92 580 aa25.42■■□□□ 1.66
CCDC47-204ENST00000582252 A0A1W2PRG0 241 aa25.41■■□□□ 1.66
CCDC47-204ENST00000582252 EDIL3O43854 480 aa25.41■■□□□ 1.66
CCDC47-204ENST00000582252 EAPPQ56P03 285 aaPredicted RBP25.41■■□□□ 1.66
CCDC47-204ENST00000582252 HSP90AA4PQ58FG1 418 aa25.41■■□□□ 1.66
CCDC47-204ENST00000582252 SPECC1LQ69YQ0 1117 aa25.41■■□□□ 1.66
CCDC47-204ENST00000582252 SV2BQ7L1I2 683 aa25.41■■□□□ 1.66
CCDC47-204ENST00000582252 MMTAG2Q9BU76 263 aaKnown RBP25.41■■□□□ 1.66
CCDC47-204ENST00000582252 SSC5DA1L4H1 1573 aa25.41■■□□□ 1.66
CCDC47-204ENST00000582252 CYP3A7-CYP3A51PA0A087WV96 503 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 KLRC4O43908 158 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 CTNND1O60716 968 aaKnown RBP25.4■■□□□ 1.66
CCDC47-204ENST00000582252 CYP3A7P24462 503 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 PRAMEF18Q5VWM3 479 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 CHURC1Q8WUH1 139 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 TRIM9Q9C026 710 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 EXOC1Q9NV70 894 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 KDM3AQ9Y4C1 1321 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 SPDYE3A6NKU9 549 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L15C9J2P7 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L13C9JLJ4 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L11C9JVI0 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L18D6R9N7 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L22D6RA61 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L17D6RBQ6 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L19D6RCP7 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L20D6RJB6 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 PSMA7O14818 248 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L24Q0WX57 530 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 NR1I3Q14994 352 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 USP17L6PQ6QN14 398 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 ADSSL1Q8N142 457 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 SNX29Q8TEQ0 813 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 INTS13Q9NVM9 706 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 PRR12Q9ULL5 1215 aa25.4■■□□□ 1.66
CCDC47-204ENST00000582252 ADM5C9JUS6 153 aa25.39■■□□□ 1.65
CCDC47-204ENST00000582252 CCP110O43303 1012 aa25.39■■□□□ 1.65
CCDC47-204ENST00000582252 PRCPP42785 496 aa25.39■■□□□ 1.65
CCDC47-204ENST00000582252 ASIC1P78348 528 aa25.39■■□□□ 1.65
CCDC47-204ENST00000582252 FAM160B2Q86V87 743 aa25.39■■□□□ 1.65
CCDC47-204ENST00000582252 SLFN12Q8IYM2 578 aa25.39■■□□□ 1.65
CCDC47-204ENST00000582252 GIMAP8Q8ND71 665 aaPredicted RBP25.39■■□□□ 1.65
CCDC47-204ENST00000582252 ZNF112Q9UJU3 913 aa25.39■■□□□ 1.65
CCDC47-204ENST00000582252 PCDHA12Q9UN75 941 aa25.39■■□□□ 1.65
CCDC47-204ENST00000582252 MEIS2O14770 477 aa25.38■■□□□ 1.65
CCDC47-204ENST00000582252 PLA2G6O60733 806 aa25.38■■□□□ 1.65
CCDC47-204ENST00000582252 GRB10Q13322 594 aa25.38■■□□□ 1.65
CCDC47-204ENST00000582252 MBOAT7Q96N66 472 aa25.38■■□□□ 1.65
CCDC47-204ENST00000582252 VCPKMTQ9H867 229 aa25.38■■□□□ 1.65
CCDC47-204ENST00000582252 GDAQ9Y2T3 454 aa25.38■■□□□ 1.65
CCDC47-204ENST00000582252 ECE1P42892 770 aa25.37■■□□□ 1.65
CCDC47-204ENST00000582252 USH1GQ495M9 461 aa25.37■■□□□ 1.65
CCDC47-204ENST00000582252 CNNM4Q6P4Q7 775 aa25.37■■□□□ 1.65
CCDC47-204ENST00000582252 NOC3LQ8WTT2 800 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms