RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 GTF2A2P52657 109 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 ERVFRD-1P60508 538 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 SQSTM1Q13501 440 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 STYK1Q6J9G0 422 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 ZNF605Q86T29 641 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 NOP9Q86U38 636 aaKnown RBP6.55□□□□□ -1.36
NF1-220ENST00000581113 KISS1RQ969F8 398 aaPredicted RBP6.55□□□□□ -1.36
NF1-220ENST00000581113 RNPC3Q96LT9 517 aaKnown RBP6.55□□□□□ -1.36
NF1-220ENST00000581113 MTA3Q9BTC8 594 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 DCP1AQ9NPI6 582 aaPredicted RBP6.55□□□□□ -1.36
NF1-220ENST00000581113 FBXL7Q9UJT9 491 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 TRAF6Q9Y4K3 522 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 RNF114Q9Y508 228 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 MRPL42Q9Y6G3 142 aaKnown RBP6.55□□□□□ -1.36
NF1-220ENST00000581113 C22orf46C9J442 243 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 PAX4O43316 350 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 MSCO60682 206 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 RBM10P98175 930 aaKnown RBP6.54□□□□□ -1.36
NF1-220ENST00000581113 LSAMPQ13449 338 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 RAB3GAP1Q15042 981 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 RSPO2Q6UXX9 243 aaPredicted RBP6.54□□□□□ -1.36
NF1-220ENST00000581113 CEP68Q76N32 757 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 JAZF1Q86VZ6 243 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 PTPRN2Q92932 1015 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 TMEM169Q96HH4 297 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 EPB41L4BQ9H329 900 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 KCNK12Q9HB15 430 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 ASXL2Q76L83 1435 aa6.54□□□□□ -1.36
NF1-220ENST00000581113 ESYT3A0FGR9 886 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 NTRK1P04629 796 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 DBHP09172 617 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 C6orf222P0C671 652 aaPredicted RBP6.53□□□□□ -1.36
NF1-220ENST00000581113 PAQR3Q6TCH7 311 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 NLRP10Q86W26 655 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 PLEKHO2Q8TD55 490 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 TRMT2BQ96GJ1 504 aaKnown RBP6.53□□□□□ -1.36
NF1-220ENST00000581113 RXFP1Q9HBX9 757 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 CLDND1Q9NY35 253 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 DBR1Q9UK59 544 aaKnown RBP6.53□□□□□ -1.36
NF1-220ENST00000581113 CCDC163A0A0D9SF12 145 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 CYBBP04839 570 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 GLI4P10075 376 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 GABREP78334 506 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 WWC2Q6AWC2 1192 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 RPTNQ6XPR3 784 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 MAMDC2Q7Z304 686 aaPredicted RBP6.53□□□□□ -1.36
NF1-220ENST00000581113 IFNL3Q8IZI9 196 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 ZFYVE21Q9BQ24 234 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 TMEM260Q9NX78 707 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 NDOR1Q9UHB4 597 aa6.53□□□□□ -1.36
NF1-220ENST00000581113 ZC3H12DA2A288 527 aaKnown RBP6.52□□□□□ -1.37
NF1-220ENST00000581113 F8W031 263 aaPredicted RBP6.52□□□□□ -1.37
NF1-220ENST00000581113 AQP7O14520 342 aa6.52□□□□□ -1.37
NF1-220ENST00000581113 SRGAP3O43295 1099 aa6.52□□□□□ -1.37
NF1-220ENST00000581113 GPR85P60893 370 aa6.52□□□□□ -1.37
NF1-220ENST00000581113 NR1I3Q14994 352 aa6.52□□□□□ -1.37
NF1-220ENST00000581113 GIMAP6Q6P9H5 292 aa6.52□□□□□ -1.37
NF1-220ENST00000581113 LBX2Q6XYB7 198 aa6.52□□□□□ -1.37
NF1-220ENST00000581113 MTDHQ86UE4 582 aaKnown RBP6.52□□□□□ -1.37
NF1-220ENST00000581113 ZNF552Q9H707 407 aaPredicted RBP6.52□□□□□ -1.37
NF1-220ENST00000581113 KLHL14Q9P2G3 628 aa6.52□□□□□ -1.37
NF1-220ENST00000581113 COA3Q9Y2R0 106 aaPredicted RBP6.52□□□□□ -1.37
NF1-220ENST00000581113 H7BY64 318 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 TMEM62Q0P6H9 643 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 KIZQ2M2Z5 673 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 PLEKHN1Q494U1 663 aaPredicted RBP6.51□□□□□ -1.37
NF1-220ENST00000581113 OLFML2BQ68BL8 750 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 HOMER1Q86YM7 354 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.51□□□□□ -1.37
NF1-220ENST00000581113 ALG1Q9BT22 464 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 SLC52A2Q9HAB3 445 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 NCOA5Q9HCD5 579 aaKnown RBP6.51□□□□□ -1.37
NF1-220ENST00000581113 FANCLQ9NW38 375 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 PPARGC1AQ9UBK2 798 aaKnown RBP6.51□□□□□ -1.37
NF1-220ENST00000581113 SFMBT1Q9UHJ3 866 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 HCFC2Q9Y5Z7 792 aa6.51□□□□□ -1.37
NF1-220ENST00000581113 ABLIM1O14639 778 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 PPP1R12AO14974 1030 aaPredicted RBP6.5□□□□□ -1.37
NF1-220ENST00000581113 ASMTLO95671 621 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 GRK2P25098 689 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 VIPR1P32241 457 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 GRK3P35626 688 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 SRSF3P84103 164 aaKnown RBP6.5□□□□□ -1.37
NF1-220ENST00000581113 GUCY1A3Q02108 690 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 MROH9Q5TGP6 573 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 TMEM132EQ6IEE7 984 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 ZC3H14Q6PJT7 736 aaKnown RBP6.5□□□□□ -1.37
NF1-220ENST00000581113 TMC6Q7Z403 805 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 Q8N1Y9 231 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 NETO2Q8NC67 525 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 FBXO15Q8NCQ5 510 aaPredicted RBP6.5□□□□□ -1.37
NF1-220ENST00000581113 APPBP2Q92624 585 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 JAM3Q9BX67 310 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 NUDT5Q9UKK9 219 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 TMA7Q9Y2S6 64 aaKnown RBP6.5□□□□□ -1.37
NF1-220ENST00000581113 SIT1Q9Y3P8 196 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 X6R8D5 127 aa6.5□□□□□ -1.37
NF1-220ENST00000581113 CDC45O75419 566 aa6.49□□□□□ -1.37
NF1-220ENST00000581113 RAPGEF3O95398 923 aa6.49□□□□□ -1.37
NF1-220ENST00000581113 MAPKAPK2P49137 400 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms