RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 CFBP00751 764 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 MYL3P08590 195 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 CPT1AP50416 773 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 TROAPQ12815 778 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 SART3Q15020 963 aaKnown RBP24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 TMEM67Q5HYA8 995 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 MB21D2Q8IYB1 491 aaPredicted RBP24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 IGDCC4Q8TDY8 1250 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 FAM161BQ96MY7 647 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 LSG1Q9H089 658 aaKnown RBP24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 TRPV6Q9H1D0 765 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 POLR3EQ9NVU0 708 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 CSF2RAP15509 400 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 CYP2C18P33260 490 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 PURAQ00577 322 aaKnown RBP24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 TTLL4Q14679 1199 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 C16orf59Q7L2K0 433 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 HOMER1Q86YM7 354 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 PIGSQ96S52 555 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 IWS1Q96ST2 819 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.75■■□□□ 1.551e-7■□□□□ 11.3
CSNK1D-216ENST00000581108 ESYT1Q9BSJ8 1104 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 SEZ6LQ9BYH1 1024 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 RIOX1Q9H6W3 641 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 PCDHA1Q9Y5I3 950 aa24.75■■□□□ 1.55
CSNK1D-216ENST00000581108 B4GALT4O60513 344 aa24.74■■□□□ 1.55
CSNK1D-216ENST00000581108 SMAD3P84022 425 aaKnown RBP24.74■■□□□ 1.55
CSNK1D-216ENST00000581108 STXBP2Q15833 593 aa24.74■■□□□ 1.55
CSNK1D-216ENST00000581108 ARHGEF16Q5VV41 709 aa24.74■■□□□ 1.55
CSNK1D-216ENST00000581108 CCDC62Q6P9F0 684 aa24.74■■□□□ 1.55
CSNK1D-216ENST00000581108 SEPT14Q6ZU15 432 aa24.74■■□□□ 1.55
CSNK1D-216ENST00000581108 TMEM199Q8N511 208 aa24.74■■□□□ 1.55
CSNK1D-216ENST00000581108 A6NJR5 290 aa24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 CYTH3O43739 400 aa24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 EIF2AK2P19525 551 aaKnown RBP24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 HSD17B4P51659 736 aa24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 PPIGQ13427 754 aaKnown RBP eCLIP24.73■■□□□ 1.551e-7■■□□□ 12.2
CSNK1D-216ENST00000581108 BRDTQ58F21 947 aaPredicted RBP24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 CATIPQ7Z7H3 387 aa24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 MTG1Q9BT17 334 aaPredicted RBP24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 GPHNQ9NQX3 736 aaPredicted RBP24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 STXBP5LQ9Y2K9 1186 aa24.73■■□□□ 1.55
CSNK1D-216ENST00000581108 UMODL1Q5DID0 1318 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 ACRP10323 421 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 GHRHRQ02643 423 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 LY6KQ17RY6 165 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 ZNF697Q5TEC3 545 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 CENPQQ7L2Z9 268 aaPredicted RBP24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 GUCD1Q96NT3 240 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 ALDH8A1Q9H2A2 487 aaPredicted RBP24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 HIPK3Q9H422 1215 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 PXMP2Q9NR77 195 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 SCN10AQ9Y5Y9 1956 aa24.72■■□□□ 1.55
CSNK1D-216ENST00000581108 MYH7BA7E2Y1 1941 aa24.71■■□□□ 1.55
CSNK1D-216ENST00000581108 NR3C2P08235 984 aa24.71■■□□□ 1.55
CSNK1D-216ENST00000581108 HOXA13P31271 388 aaPredicted RBP24.71■■□□□ 1.55
CSNK1D-216ENST00000581108 COL9A3Q14050 684 aaPredicted RBP24.71■■□□□ 1.55
CSNK1D-216ENST00000581108 TMEM240Q5SV17 173 aa24.71■■□□□ 1.55
CSNK1D-216ENST00000581108 PPP1R13LQ8WUF5 828 aa24.71■■□□□ 1.55
CSNK1D-216ENST00000581108 LY9Q9HBG7 655 aa24.71■■□□□ 1.55
CSNK1D-216ENST00000581108 SLC27A2O14975 620 aa24.7■■□□□ 1.54
CSNK1D-216ENST00000581108 PRC1O43663 620 aa24.7■■□□□ 1.54
CSNK1D-216ENST00000581108 NBPF20Q3BBV1 942 aa24.7■■□□□ 1.54
CSNK1D-216ENST00000581108 NOC4LQ9BVI4 516 aaKnown RBP24.7■■□□□ 1.54
CSNK1D-216ENST00000581108 SEMA6BQ9H3T3 888 aa24.7■■□□□ 1.54
CSNK1D-216ENST00000581108 TRMT13Q9NUP7 481 aaKnown RBP24.7■■□□□ 1.54
CSNK1D-216ENST00000581108 MAP3K20Q9NYL2 800 aaKnown RBP24.7■■□□□ 1.54
CSNK1D-216ENST00000581108 PNMA6FA0A0J9YX94 578 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 KPNA6O60684 536 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 EIF3JO75822 258 aaKnown RBP24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 CCL23P55773 120 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 NECTIN1Q15223 517 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 BMP2KLQ5H9B9 411 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 CASC1Q6TDU7 716 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 ZNF365Q70YC5 407 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 AFG1LQ8WV93 481 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 PIBF1Q8WXW3 757 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 MYL10Q9BUA6 226 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 ANO2Q9NQ90 1003 aa24.69■■□□□ 1.54
CSNK1D-216ENST00000581108 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 GH1P01241 217 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 MCM5P33992 734 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 ARHGAP1Q07960 439 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 TRAF1Q13077 416 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 FAM47CQ5HY64 1035 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 CREB3L3Q68CJ9 461 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 ZNF654Q8IZM8 581 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 SLC17A8Q8NDX2 589 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 PDCD2LQ9BRP1 358 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 IL23AQ9NPF7 189 aa24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 DDX41Q9UJV9 622 aaKnown RBP24.68■■□□□ 1.54
CSNK1D-216ENST00000581108 CYP2C9P11712 490 aa24.67■■□□□ 1.54
CSNK1D-216ENST00000581108 MYCLP12524 364 aaPredicted RBP24.67■■□□□ 1.54
CSNK1D-216ENST00000581108 SAMD3Q8N6K7 520 aa24.67■■□□□ 1.54
CSNK1D-216ENST00000581108 WNT8AQ9H1J5 351 aa24.67■■□□□ 1.54
CSNK1D-216ENST00000581108 TTYH1Q9H313 450 aaPredicted RBP24.67■■□□□ 1.54
CSNK1D-216ENST00000581108 GCOM1H8Y6P7 765 aaPredicted RBP24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 SUPT20HL2P0C7V6 817 aa24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 POLR2MP0CAP2 368 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms