RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 ARHGEF15O94989 841 aa11.71□□□□□ -0.53
RFFL-208ENST00000581039 TXNP10599 105 aaKnown RBP11.71□□□□□ -0.53
RFFL-208ENST00000581039 PTGISQ16647 500 aa11.71□□□□□ -0.53
RFFL-208ENST00000581039 ZMYM1Q5SVZ6 1142 aa11.71□□□□□ -0.53
RFFL-208ENST00000581039 CCDC155Q8N6L0 562 aa11.71□□□□□ -0.53
RFFL-208ENST00000581039 GPCPD1Q9NPB8 672 aa11.71□□□□□ -0.53
RFFL-208ENST00000581039 TOMM22Q9NS69 142 aa11.71□□□□□ -0.53
RFFL-208ENST00000581039 LMCD1Q9NZU5 365 aa11.71□□□□□ -0.53
RFFL-208ENST00000581039 FRMPD2Q68DX3 1309 aaPredicted RBP11.7□□□□□ -0.54
RFFL-208ENST00000581039 LPXNO60711 386 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 GPR37L1O60883 481 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 TOP1P11387 765 aaKnown RBP11.7□□□□□ -0.54
RFFL-208ENST00000581039 NOVP48745 357 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 RPS6P62753 249 aaKnown RBP11.7□□□□□ -0.54
RFFL-208ENST00000581039 SLC30A10Q6XR72 485 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 DNERQ8NFT8 737 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 CAGE1Q8TC20 777 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 AFAP1L1Q8TED9 768 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 CLEC4DQ8WXI8 215 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 COPS5Q92905 334 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
RFFL-208ENST00000581039 ORC4O43929 436 aa11.69□□□□□ -0.54
RFFL-208ENST00000581039 WDR5P61964 334 aaKnown RBP11.69□□□□□ -0.54
RFFL-208ENST00000581039 RRP12Q5JTH9 1297 aaKnown RBP11.69□□□□□ -0.54
RFFL-208ENST00000581039 C20orf194Q5TEA3 1177 aa11.69□□□□□ -0.54
RFFL-208ENST00000581039 MIER1Q8N108 512 aa11.69□□□□□ -0.54
RFFL-208ENST00000581039 TMEM47Q9BQJ4 181 aa11.69□□□□□ -0.54
RFFL-208ENST00000581039 ANAPC4Q9UJX5 808 aa11.69□□□□□ -0.54
RFFL-208ENST00000581039 TRANK1O15050 2925 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 LCHNA4D1U4 455 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 PARNO95453 639 aaKnown RBP11.68□□□□□ -0.54
RFFL-208ENST00000581039 SELPP16109 830 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 EDNRBP24530 442 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 LRRC8DQ7L1W4 858 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 SPRED2Q7Z698 418 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 TMCO2Q7Z6W1 182 aaPredicted RBP11.68□□□□□ -0.54
RFFL-208ENST00000581039 PI4K2BQ8TCG2 481 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 RAD9AQ99638 391 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 MTUS1Q9ULD2 1270 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 LRRC37A2A6NM11 1700 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 REV3LO60673 3130 aa11.68□□□□□ -0.54
RFFL-208ENST00000581039 ABHD14A-ACY1A0A1B0GW23 586 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 FAM86C2PA6NEL3 165 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 FOXP2O15409 715 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 ARIH2O95376 493 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 FGRP09769 529 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 PDHBP11177 359 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 CASTP20810 708 aaKnown RBP11.67□□□□□ -0.54
RFFL-208ENST00000581039 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
RFFL-208ENST00000581039 CNKSR3Q6P9H4 555 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 SESTD1Q86VW0 696 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 GDPD5Q8WTR4 605 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 AFG1LQ8WV93 481 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.54
RFFL-208ENST00000581039 TGS1Q96RS0 853 aaKnown RBP11.67□□□□□ -0.54
RFFL-208ENST00000581039 CRBNQ96SW2 442 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 SUGCTQ9HAC7 445 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 TCP11L1Q9NUJ3 509 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
RFFL-208ENST00000581039 WDR19Q8NEZ3 1342 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 EFCAB14O75071 495 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 GJB5O95377 273 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 GH1P01241 217 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 MMP3P08254 477 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 ERVK-21P61565 698 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 DEFB103AP81534 67 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 ZNF543Q08ER8 600 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 IKBKEQ14164 716 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 GPNMBQ14956 572 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 ALX1Q15699 326 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 LY6KQ17RY6 165 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 CCDC62Q6P9F0 684 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 SEPT14Q6ZU15 432 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 CHST3Q7LGC8 479 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 C7orf31Q8N865 590 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 TTC14Q96N46 770 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 CD320Q9NPF0 282 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 C11orf16Q9NQ32 467 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 SCN10AQ9Y5Y9 1956 aa11.66□□□□□ -0.54
RFFL-208ENST00000581039 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.65□□□□□ -0.54
RFFL-208ENST00000581039 NBNO60934 754 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 CXCL10P02778 98 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 CKBP12277 381 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 MX1P20591 662 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 STXBP2Q15833 593 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 DGKDQ16760 1214 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 LEXMQ3ZCV2 418 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 USH1GQ495M9 461 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 FAM117BQ6P1L5 589 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 GJD3Q8N144 294 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 OTUD7AQ8TE49 926 aaPredicted RBP11.65□□□□□ -0.54
RFFL-208ENST00000581039 NSUN6Q8TEA1 469 aaKnown RBP11.65□□□□□ -0.54
RFFL-208ENST00000581039 DHX38Q92620 1227 aaKnown RBP11.65□□□□□ -0.54
RFFL-208ENST00000581039 KAT2BQ92831 832 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.54
RFFL-208ENST00000581039 UBE2ZQ9H832 354 aaPredicted RBP11.65□□□□□ -0.54
RFFL-208ENST00000581039 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms