RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 DHX32Q7L7V1 743 aaKnown RBP31.08■■■□□ 2.57
LINC00271-207ENST00000580741 SH3RF1Q7Z6J0 888 aa31.08■■■□□ 2.57
LINC00271-207ENST00000580741 MICU3Q86XE3 530 aa31.08■■■□□ 2.57
LINC00271-207ENST00000580741 SRBD1Q8N5C6 995 aaKnown RBP31.08■■■□□ 2.57
LINC00271-207ENST00000580741 CPA1P15085 419 aa31.07■■■□□ 2.56
LINC00271-207ENST00000580741 KRT32Q14532 448 aa31.07■■■□□ 2.56
LINC00271-207ENST00000580741 ARHGEF16Q5VV41 709 aa31.07■■■□□ 2.56
LINC00271-207ENST00000580741 SGMS1Q86VZ5 419 aa31.07■■■□□ 2.56
LINC00271-207ENST00000580741 COPS5Q92905 334 aa31.07■■■□□ 2.56
LINC00271-207ENST00000580741 Q9Y3F1 56 aa31.07■■■□□ 2.56
LINC00271-207ENST00000580741 CALM1P0DP23 149 aa31.06■■■□□ 2.56
LINC00271-207ENST00000580741 CALM2P0DP24 149 aa31.06■■■□□ 2.56
LINC00271-207ENST00000580741 CALM3P0DP25 149 aa31.06■■■□□ 2.56
LINC00271-207ENST00000580741 GNAQP50148 359 aa31.06■■■□□ 2.56
LINC00271-207ENST00000580741 GHRHRQ02643 423 aa31.06■■■□□ 2.56
LINC00271-207ENST00000580741 PPP2R5BQ15173 497 aa31.06■■■□□ 2.56
LINC00271-207ENST00000580741 SCFD2Q8WU76 684 aa31.06■■■□□ 2.56
LINC00271-207ENST00000580741 RRP36Q96EU6 259 aaKnown RBP31.06■■■□□ 2.56
LINC00271-207ENST00000580741 UBE2OQ9C0C9 1292 aaKnown RBP31.06■■■□□ 2.56
LINC00271-207ENST00000580741 PXMP2Q9NR77 195 aa31.06■■■□□ 2.56
LINC00271-207ENST00000580741 ELP1O95163 1332 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 TRIM43BA6NCK2 446 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 ARIH2O95376 493 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 BMP8BP34820 402 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 HSPA4P34932 840 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 TRAF1Q13077 416 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 OR6J1Q8NGC5 347 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 KCNB2Q92953 911 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 TRIM43Q96BQ3 446 aaPredicted RBP31.05■■■□□ 2.56
LINC00271-207ENST00000580741 LBHD1Q9BQE6 289 aaPredicted RBP31.05■■■□□ 2.56
LINC00271-207ENST00000580741 LZTS2Q9BRK4 669 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 SNX14Q9Y5W7 946 aa31.05■■■□□ 2.56
LINC00271-207ENST00000580741 LAMA3Q16787 3333 aa31.04■■■□□ 2.56
LINC00271-207ENST00000580741 REC8O95072 547 aa31.04■■■□□ 2.56
LINC00271-207ENST00000580741 SLC34A2O95436 690 aa31.04■■■□□ 2.56
LINC00271-207ENST00000580741 SEPT14Q6ZU15 432 aa31.04■■■□□ 2.56
LINC00271-207ENST00000580741 CCDC82Q8N4S0 544 aa31.04■■■□□ 2.56
LINC00271-207ENST00000580741 FANCBQ8NB91 859 aa31.04■■■□□ 2.56
LINC00271-207ENST00000580741 JAKMIP1Q96N16 626 aaKnown RBP31.04■■■□□ 2.56
LINC00271-207ENST00000580741 IWS1Q96ST2 819 aa31.04■■■□□ 2.56
LINC00271-207ENST00000580741 BRPF3Q9ULD4 1205 aa31.04■■■□□ 2.56
LINC00271-207ENST00000580741 A0A0U1RQG5 324 aaPredicted RBP31.03■■■□□ 2.56
LINC00271-207ENST00000580741 hCG_1642624A0A1W2PR95 340 aa31.03■■■□□ 2.56
LINC00271-207ENST00000580741 GCOM1H8Y6P7 765 aaPredicted RBP31.03■■■□□ 2.56
LINC00271-207ENST00000580741 CLTBP09497 229 aa31.03■■■□□ 2.56
LINC00271-207ENST00000580741 POLR2MP0CAP2 368 aa31.03■■■□□ 2.56
LINC00271-207ENST00000580741 SMARCA1P28370 1054 aa31.03■■■□□ 2.56
LINC00271-207ENST00000580741 STXBP2Q15833 593 aa31.03■■■□□ 2.56
LINC00271-207ENST00000580741 APOA5Q6Q788 366 aa31.03■■■□□ 2.56
LINC00271-207ENST00000580741 SYNE3Q6ZMZ3 975 aa31.03■■■□□ 2.56
LINC00271-207ENST00000580741 FCHSD1Q86WN1 690 aa31.03■■■□□ 2.56
LINC00271-207ENST00000580741 SEC63Q9UGP8 760 aaKnown RBP31.03■■■□□ 2.56
LINC00271-207ENST00000580741 ZEB2O60315 1214 aa31.02■■■□□ 2.56
LINC00271-207ENST00000580741 NR3C2P08235 984 aa31.02■■■□□ 2.56
LINC00271-207ENST00000580741 TXNP10599 105 aaKnown RBP31.02■■■□□ 2.56
LINC00271-207ENST00000580741 TTLL4Q14679 1199 aa31.02■■■□□ 2.56
LINC00271-207ENST00000580741 TMTC3Q6ZXV5 915 aa31.02■■■□□ 2.56
LINC00271-207ENST00000580741 A0A1W2PPC1 479 aa31.01■■■□□ 2.55
LINC00271-207ENST00000580741 ANKRD33Q7Z3H0 272 aa31.01■■■□□ 2.55
LINC00271-207ENST00000580741 PDCD2LQ9BRP1 358 aa31.01■■■□□ 2.55
LINC00271-207ENST00000580741 MAP3K20Q9NYL2 800 aaKnown RBP31.01■■■□□ 2.55
LINC00271-207ENST00000580741 DCDC2CA8MYV0 355 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 ARVCFO00192 962 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 HMGB1P09429 215 aaKnown RBP31■■■□□ 2.55
LINC00271-207ENST00000580741 MYCLP12524 364 aaPredicted RBP31■■■□□ 2.55
LINC00271-207ENST00000580741 ITGB8P26012 769 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 CDK7P50613 346 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 PSMC6P62333 389 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 FAAP100Q0VG06 881 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 IL31RAQ8NI17 732 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 BADQ92934 168 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 TMEM39AQ9NV64 488 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 LTBP2Q14767 1821 aa31■■■□□ 2.55
LINC00271-207ENST00000580741 KLF18A0A0U1RQI7 1052 aa30.99■■■□□ 2.55
LINC00271-207ENST00000580741 NKRFO15226 690 aaKnown RBP eCLIP30.99■■■□□ 2.55
LINC00271-207ENST00000580741 LY6KQ17RY6 165 aa30.99■■■□□ 2.55
LINC00271-207ENST00000580741 CCDC62Q6P9F0 684 aa30.99■■■□□ 2.55
LINC00271-207ENST00000580741 SAMD3Q8N6K7 520 aa30.99■■■□□ 2.55
LINC00271-207ENST00000580741 ZFP91Q96JP5 570 aaPredicted RBP30.99■■■□□ 2.55
LINC00271-207ENST00000580741 TOX2Q96NM4 488 aa30.99■■■□□ 2.55
LINC00271-207ENST00000580741 ZBTB43O43298 467 aa30.98■■■□□ 2.55
LINC00271-207ENST00000580741 CABYRO75952 493 aa30.98■■■□□ 2.55
LINC00271-207ENST00000580741 MYL3P08590 195 aa30.98■■■□□ 2.55
LINC00271-207ENST00000580741 CPT1AP50416 773 aa30.98■■■□□ 2.55
LINC00271-207ENST00000580741 PGM5Q15124 567 aa30.98■■■□□ 2.55
LINC00271-207ENST00000580741 NAP1L2Q9ULW6 460 aaPredicted RBP30.98■■■□□ 2.55
LINC00271-207ENST00000580741 GRIN2DO15399 1336 aa30.98■■■□□ 2.55
LINC00271-207ENST00000580741 EIF3JO75822 258 aaKnown RBP30.97■■■□□ 2.55
LINC00271-207ENST00000580741 FGD1P98174 961 aa30.97■■■□□ 2.55
LINC00271-207ENST00000580741 ITGA7Q13683 1181 aa30.97■■■□□ 2.55
LINC00271-207ENST00000580741 RTN1Q16799 776 aa30.97■■■□□ 2.55
LINC00271-207ENST00000580741 BLOC1S2Q6QNY1 142 aa30.97■■■□□ 2.55
LINC00271-207ENST00000580741 Q6ZUG5 572 aa30.97■■■□□ 2.55
LINC00271-207ENST00000580741 TDHQ8IZJ6 230 aa30.97■■■□□ 2.55
LINC00271-207ENST00000580741 MROH7Q68CQ1 1323 aa30.97■■■□□ 2.55
LINC00271-207ENST00000580741 GOLGA8AA7E2F4 631 aa30.96■■■□□ 2.55
LINC00271-207ENST00000580741 GOLGA8BA8MQT2 603 aa30.96■■■□□ 2.55
LINC00271-207ENST00000580741 SOX1O00570 391 aaPredicted RBP30.96■■■□□ 2.55
LINC00271-207ENST00000580741 KIAA0355O15063 1070 aa30.96■■■□□ 2.55
LINC00271-207ENST00000580741 CNTNAP5Q8WYK1 1306 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms