RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 HOMER1Q86YM7 354 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 RIOX2Q8IUF8 465 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 CCDC82Q8N4S0 544 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 SHCBP1Q8NEM2 672 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 WASF1Q92558 559 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 TRIM43Q96BQ3 446 aaPredicted RBP13.99□□□□□ -0.17
CCDC84-209ENST00000580556 SLC26A6Q9BXS9 759 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 SPATC1LQ9H0A9 340 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 VAT1LQ9HCJ6 419 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 PDLIM7Q9NR12 457 aa13.99□□□□□ -0.17
CCDC84-209ENST00000580556 V9GY48 417 aaPredicted RBP13.99□□□□□ -0.17
CCDC84-209ENST00000580556 COL11A1P12107 1806 aaPredicted RBP13.99□□□□□ -0.17
CCDC84-209ENST00000580556 ABCB11O95342 1321 aa13.98□□□□□ -0.17
CCDC84-209ENST00000580556 PPP1R11O60927 126 aaPredicted RBP13.98□□□□□ -0.17
CCDC84-209ENST00000580556 PTPREP23469 700 aa13.98□□□□□ -0.17
CCDC84-209ENST00000580556 PKN1Q16512 942 aa13.98□□□□□ -0.17
CCDC84-209ENST00000580556 TJAP1Q5JTD0 557 aa13.98□□□□□ -0.17
CCDC84-209ENST00000580556 SNRNP48Q6IEG0 339 aaKnown RBP13.98□□□□□ -0.17
CCDC84-209ENST00000580556 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
CCDC84-209ENST00000580556 BARHL2Q9NY43 387 aa13.98□□□□□ -0.17
CCDC84-209ENST00000580556 ORC3Q9UBD5 711 aaPredicted RBP13.98□□□□□ -0.17
CCDC84-209ENST00000580556 CCPG1Q9ULG6 757 aa13.98□□□□□ -0.17
CCDC84-209ENST00000580556 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
CCDC84-209ENST00000580556 JAK2O60674 1132 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
CCDC84-209ENST00000580556 CYBAP13498 195 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 FDPSP14324 419 aaKnown RBP13.97□□□□□ -0.17
CCDC84-209ENST00000580556 SNAP25P60880 206 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 CCDC174Q6PII3 467 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 CPXCR1Q8N123 301 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 CHST13Q8NET6 341 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 AGBL1Q96MI9 1066 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 MOV10L1Q9BXT6 1211 aaKnown RBP13.97□□□□□ -0.17
CCDC84-209ENST00000580556 MROH8Q9H579 483 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 RAVER2Q9HCJ3 691 aaKnown RBP13.97□□□□□ -0.17
CCDC84-209ENST00000580556 FBXO40Q9UH90 709 aa13.97□□□□□ -0.17
CCDC84-209ENST00000580556 ESYT2A0FGR8 921 aa13.96□□□□□ -0.17
CCDC84-209ENST00000580556 SLC15A5A6NIM6 579 aa13.96□□□□□ -0.17
CCDC84-209ENST00000580556 MSCO60682 206 aa13.96□□□□□ -0.17
CCDC84-209ENST00000580556 IGHA2P01877 340 aa13.96□□□□□ -0.17
CCDC84-209ENST00000580556 PLS1Q14651 629 aa13.96□□□□□ -0.17
CCDC84-209ENST00000580556 WWC2Q6AWC2 1192 aa13.96□□□□□ -0.17
CCDC84-209ENST00000580556 CCDC12Q8WUD4 166 aaPredicted RBP13.96□□□□□ -0.17
CCDC84-209ENST00000580556 SMC3Q9UQE7 1217 aa13.96□□□□□ -0.17
CCDC84-209ENST00000580556 MRPL11Q9Y3B7 192 aaKnown RBP13.96□□□□□ -0.17
CCDC84-209ENST00000580556 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.17
CCDC84-209ENST00000580556 PCDHA1Q9Y5I3 950 aa13.96□□□□□ -0.17
CCDC84-209ENST00000580556 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 STXBP3O00186 592 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 HOXC6P09630 235 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 XBP1P17861 261 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 ADCYAP1R1P41586 468 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 GHRHRQ02643 423 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 GRB14Q14449 540 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 SNX17Q15036 470 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 PRAMEF19Q5SWL8 479 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 HEATR3Q7Z4Q2 680 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 SAMD3Q8N6K7 520 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 CCDC148Q8NFR7 591 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 PIBF1Q8WXW3 757 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 PPM1EQ8WY54 764 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 RNPC3Q96LT9 517 aaKnown RBP13.95□□□□□ -0.18
CCDC84-209ENST00000580556 GLT8D2Q9H1C3 349 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 RNF146Q9NTX7 359 aa13.95□□□□□ -0.18
CCDC84-209ENST00000580556 ZNF236Q9UL36 1845 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 TMEM265A0A087WTH1 108 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 ALAS1P13196 640 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 ERCC3P19447 782 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 GJB2P29033 226 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 USH1GQ495M9 461 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 GALNT17Q6IS24 598 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 MCF2L2Q86YR7 1114 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 FAM184AQ8NB25 1140 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 ARRDC4Q8NCT1 418 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 CLEC4DQ8WXI8 215 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 GPKOWQ92917 476 aaPredicted RBP eCLIP13.94□□□□□ -0.18
CCDC84-209ENST00000580556 DDX11Q96FC9 970 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 TRERF1Q96PN7 1200 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 MAP3K20Q9NYL2 800 aaKnown RBP13.94□□□□□ -0.18
CCDC84-209ENST00000580556 RIPK3Q9Y572 518 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 MYH6P13533 1939 aa13.94□□□□□ -0.18
CCDC84-209ENST00000580556 BAZ2BQ9UIF8 2168 aaKnown RBP13.93□□□□□ -0.18
CCDC84-209ENST00000580556 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 OPLAHO14841 1288 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 STRNO43815 780 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 HSP90AA1P07900 732 aaKnown RBP13.93□□□□□ -0.18
CCDC84-209ENST00000580556 NAPAP54920 295 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 TLE2Q04725 743 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 TYW1BQ6NUM6 668 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 NCAPG2Q86XI2 1143 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 ZMYND12Q9H0C1 365 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 IVNS1ABPQ9Y6Y0 642 aa13.93□□□□□ -0.18
CCDC84-209ENST00000580556 NFIBO00712 420 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms