RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 HS1BP3Q53T59 392 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 HLA-DQA1Q5Y7H0 255 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 TMC7Q7Z402 723 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 TMC4Q7Z404 712 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 NEU4Q8WWR8 484 aaPredicted RBP4.31□□□□□ -1.72
KPNB1-208ENST00000580019 OSBPL7Q9BZF2 842 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 BRINP2Q9C0B6 783 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 MYH16Q9H6N6 1097 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 JADE2Q9NQC1 790 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 VTI1BQ9UEU0 232 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.31□□□□□ -1.72
KPNB1-208ENST00000580019 C9orf118A6NHY6 69 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 HSD3B2P26439 372 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 GBP1P32455 592 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 BMP8BP34820 402 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 MAPK8P45983 427 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 PPP2CBP62714 309 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 PPP2CAP67775 309 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 DAB2P98082 770 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 FANCCQ00597 558 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 PTH1RQ03431 593 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 FMR1Q06787 632 aaKnown RBP eCLIP4.3□□□□□ -1.72
KPNB1-208ENST00000580019 PSMD2Q13200 908 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 SNW1Q13573 536 aaKnown RBP4.3□□□□□ -1.72
KPNB1-208ENST00000580019 PRKD1Q15139 912 aaPredicted RBP4.3□□□□□ -1.72
KPNB1-208ENST00000580019 LSM12Q3MHD2 195 aaKnown RBP4.3□□□□□ -1.72
KPNB1-208ENST00000580019 RNF187Q5TA31 235 aaPredicted RBP4.3□□□□□ -1.72
KPNB1-208ENST00000580019 Q8TCH9 128 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 DDX11Q96FC9 970 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 DUSP9Q99956 384 aaKnown RBP4.3□□□□□ -1.72
KPNB1-208ENST00000580019 ACBD3Q9H3P7 528 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 BCAS3Q9H6U6 928 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 PCDH18Q9HCL0 1135 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 AP5S1Q9NUS5 200 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 TBX22Q9Y458 520 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 RIPOR2Q9Y4F9 1068 aa4.3□□□□□ -1.72
KPNB1-208ENST00000580019 LOC102724159A0A0B4J2E5 919 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 CYP2C8P10632 490 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 PWP2Q15269 919 aaKnown RBP4.29□□□□□ -1.72
KPNB1-208ENST00000580019 ENOX2Q16206 610 aaKnown RBP4.29□□□□□ -1.72
KPNB1-208ENST00000580019 NFE2L2Q16236 605 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 DIEXFQ68CQ4 756 aaKnown RBP4.29□□□□□ -1.72
KPNB1-208ENST00000580019 SLFN13Q68D06 897 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 AGMOQ6ZNB7 445 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 ARHGEF18Q6ZSZ5 1173 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 LDLRAD3Q86YD5 345 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 NAT16Q8N8M0 369 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 KIF2CQ99661 725 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 C11orf84Q9BUA3 381 aaPredicted RBP4.29□□□□□ -1.72
KPNB1-208ENST00000580019 CHST7Q9NS84 486 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 TTF2Q9UNY4 1162 aaKnown RBP4.29□□□□□ -1.72
KPNB1-208ENST00000580019 INPP5FQ9Y2H2 1132 aa4.29□□□□□ -1.72
KPNB1-208ENST00000580019 NOP58Q9Y2X3 529 aaKnown RBP4.29□□□□□ -1.72
KPNB1-208ENST00000580019 BICRAQ9NZM4 1560 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 CHURC1-FNTBB4DL54 471 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 STK10O94804 968 aaKnown RBP4.28□□□□□ -1.72
KPNB1-208ENST00000580019 SLC9A5Q14940 896 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 ZNF654Q8IZM8 581 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 KYQ8NBH2 561 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 FBF1Q8TES7 1133 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 GPATCH3Q96I76 525 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 FAM161BQ96MY7 647 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 AGAP2Q99490 1192 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 GORASP1Q9BQQ3 440 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 OSBPL2Q9H1P3 480 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 PIF1Q9H611 641 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 KLHL3Q9UH77 587 aa4.28□□□□□ -1.72
KPNB1-208ENST00000580019 UNC13AQ9UPW8 1703 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 DDX3XO00571 662 aaKnown RBP eCLIP4.27□□□□□ -1.73
KPNB1-208ENST00000580019 TPD52L2O43399 206 aaKnown RBP4.27□□□□□ -1.73
KPNB1-208ENST00000580019 VAV1P15498 845 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 TACR1P25103 407 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 CORO7P57737 925 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 DSC3Q14574 896 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 TCEAL1Q15170 157 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 GORABQ5T7V8 394 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 MRFAP1L1Q96HT8 127 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.27□□□□□ -1.73
KPNB1-208ENST00000580019 FAM8A1Q9UBU6 413 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 MINPP1Q9UNW1 487 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 SUGT1Q9Y2Z0 365 aa4.27□□□□□ -1.73
KPNB1-208ENST00000580019 USP17L7P0C7H9 530 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 MRPS21P82921 87 aaKnown RBP4.26□□□□□ -1.73
KPNB1-208ENST00000580019 HSP90AB2PQ58FF8 381 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 NBPF12Q5TAG4 269 aaPredicted RBP4.26□□□□□ -1.73
KPNB1-208ENST00000580019 ALG1LQ6GMV1 187 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 MRGPRGQ86SM5 289 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 USP48Q86UV5 1035 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 TTLL6Q8N841 843 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 UBE2Q2Q8WVN8 375 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 FRMD6Q96NE9 622 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 MAGEC2Q9UBF1 373 aaPredicted RBP4.26□□□□□ -1.73
KPNB1-208ENST00000580019 REV1Q9UBZ9 1251 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 DMRT1Q9Y5R6 373 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 NACADO15069 1562 aa4.26□□□□□ -1.73
KPNB1-208ENST00000580019 MEIS1O00470 390 aa4.25□□□□□ -1.73
KPNB1-208ENST00000580019 RGS13O14921 159 aa4.25□□□□□ -1.73
KPNB1-208ENST00000580019 BMS1Q14692 1282 aaKnown RBP4.25□□□□□ -1.73
KPNB1-208ENST00000580019 USP39Q53GS9 565 aaKnown RBP4.25□□□□□ -1.73
KPNB1-208ENST00000580019 CKAP2LQ8IYA6 745 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms