RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-208	ENST00000578525	TRIM34	Q9BYJ4	488 aa		10.44	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	DNAJC18	Q9H819	358 aa		10.44	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	DBNDD1	Q9H9R9	158 aa		10.44	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	LZTFL1	Q9NQ48	299 aa		10.44	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	FAM53C	Q9NYF3	392 aa		10.44	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MYO1A	Q9UBC5	1043 aa		10.44	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	DDX25	Q9UHL0	483 aa	Known RBP	10.44	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	LUC7L2	Q9Y383	392 aa	Known RBP	10.44	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	COL2A1	P02458	1487 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ABCB11	O95342	1321 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	TTC26	A0AVF1	554 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525		B4DLN1	442 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	PES1	O00541	588 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ECE2	O60344	883 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	FGFR1OP	O95684	399 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	APBA3	O96018	575 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	EEF2	P13639	858 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	PRKCSH	P14314	528 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ARHGAP25	P42331	645 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	PSMD2	Q13200	908 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	SEPT2	Q15019	361 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	QRICH1	Q2TAL8	776 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CERKL	Q49MI3	558 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ZNF569	Q5MCW4	686 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	DACT2	Q5SW24	774 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	HYI	Q5T013	277 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	SLFN13	Q68D06	897 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MCTP2	Q6DN12	878 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CENPP	Q6IPU0	288 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	FOXR2	Q6PJQ5	311 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	RSRC2	Q7L4I2	434 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ZFPM1	Q8IX07	1006 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	SLC35F6	Q8N357	371 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	GUF1	Q8N442	669 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	GOLGA1	Q92805	767 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	SLF1	Q9BQI6	1058 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	SEMA6B	Q9H3T3	888 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	PSTPIP2	Q9H939	334 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	KANSL2	Q9H9L4	492 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	FAM198A	Q9UFP1	575 aa		10.43	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	RGPD4	Q7Z3J3	1758 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525		A0A0U1RQJ8	604 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525		A0A1W2PQJ5	194 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CTAGE9	A4FU28	777 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	DDTL	A6NHG4	134 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	POTEM	A6NI47	508 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525		H0YIN7	160 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MARCH6	O60337	910 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	NDUFA10	O95299	355 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CLCN6	P51797	869 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	RBM5	P52756	815 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	TBC1D8B	Q0IIM8	1120 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	AP3B2	Q13367	1082 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	BMS1	Q14692	1282 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CDC37	Q16543	378 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MEA1	Q16626	185 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	FIGN	Q5HY92	759 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	TEX35	Q5T0J7	233 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	FKBP15	Q5T1M5	1219 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	TATDN1	Q6P1N9	297 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MOXD1	Q6UVY6	613 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	TMEM179	Q6ZVK1	233 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	KIAA0825	Q8IV33	1275 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	KRT222	Q8N1A0	295 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	GPR161	Q8N6U8	529 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CEP112	Q8N8E3	955 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ATRIP	Q8WXE1	791 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	RABGGTA	Q92696	567 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	HAS1	Q92839	578 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MBOAT7	Q96N66	472 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ERGIC2	Q96RQ1	377 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	NAPG	Q99747	312 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	TSG101	Q99816	390 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	NUDT12	Q9BQG2	462 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	NOC4L	Q9BVI4	516 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ANO3	Q9BYT9	981 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	TTYH3	Q9C0H2	523 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	SLC39A2	Q9NP94	309 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	PI4KB	Q9UBF8	816 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CDC23	Q9UJX2	597 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	SERPINA10	Q9UK55	444 aa		10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ENTPD3	O75355	529 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CYLC1	P35663	651 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	SLC1A4	P43007	532 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	USP11	P51784	963 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	CACNB3	P54284	484 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	KRT83	P78385	493 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ZBED6	P86452	979 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	ICA1	Q05084	483 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	LRRC63	Q05C16	580 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	EHHADH	Q08426	723 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	TCP10	Q12799	353 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MAN2A1	Q16706	1144 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	WHAMMP3	Q1A5X7	153 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	KIF4B	Q2VIQ3	1234 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MIIP	Q5JXC2	388 aa		10.41	□□□□□ -0.74
CDK5RAP3-208	ENST00000578525	MSL1	Q68DK7	614 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms