RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.46
ERBB2-207ENST00000578502 BRF1Q92994 677 aa12.2□□□□□ -0.46
ERBB2-207ENST00000578502 RRP36Q96EU6 259 aaKnown RBP12.2□□□□□ -0.46
ERBB2-207ENST00000578502 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
ERBB2-207ENST00000578502 PXMP2Q9NR77 195 aa12.2□□□□□ -0.46
ERBB2-207ENST00000578502 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
ERBB2-207ENST00000578502 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
ERBB2-207ENST00000578502 ZBTB43O43298 467 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 PPFIA3O75145 1194 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 SEC24BO95487 1268 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 CALM1P0DP23 149 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 CALM2P0DP24 149 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 CALM3P0DP25 149 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 MYCLP12524 364 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-207ENST00000578502 CST5P28325 142 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-207ENST00000578502 ADD1P35611 737 aaKnown RBP12.19□□□□□ -0.46
ERBB2-207ENST00000578502 MAGEA10P43363 369 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-207ENST00000578502 GHRHRQ02643 423 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 TLE2Q04725 743 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 FUT2Q10981 343 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 SNX17Q15036 470 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 DUSP28Q4G0W2 176 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 HABP4Q5JVS0 413 aaKnown RBP12.19□□□□□ -0.46
ERBB2-207ENST00000578502 ARHGEF16Q5VV41 709 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 USP17L6PQ6QN14 398 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 BLOC1S2Q6QNY1 142 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 CXCL17Q6UXB2 119 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 SEPT14Q6ZU15 432 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 NSUN6Q8TEA1 469 aaKnown RBP12.19□□□□□ -0.46
ERBB2-207ENST00000578502 LZTS2Q9BRK4 669 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 TSEN34Q9BSV6 310 aaKnown RBP12.19□□□□□ -0.46
ERBB2-207ENST00000578502 AP5M1Q9H0R1 490 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 PRO3102Q9H379 93 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 KIAA1217Q5T5P2 1943 aa12.19□□□□□ -0.46
ERBB2-207ENST00000578502 LAMA2P24043 3122 aaKnown RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 CNTNAP5Q8WYK1 1306 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 TRIM43BA6NCK2 446 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 GOLGA8AA7E2F4 631 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 GCOM1H8Y6P7 765 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 SORBS3O60504 671 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 PQBP1O60828 265 aaKnown RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 RGS20O76081 388 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 NR3C2P08235 984 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 HMGB1P09429 215 aaKnown RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 POLR2MP0CAP2 368 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 TXNP10599 105 aaKnown RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 SMARCA1P28370 1054 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 GNAQP50148 359 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 PSMC6P62333 389 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 FGD1P98174 961 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 MDM2Q00987 491 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 FSCN1Q16658 493 aaKnown RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 RTN1Q16799 776 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 LY6KQ17RY6 165 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 TYW1BQ6NUM6 668 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 SYNE3Q6ZMZ3 975 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 TRIM43Q96BQ3 446 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 PDCD2LQ9BRP1 358 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 UPF3BQ9BZI7 483 aaKnown RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 SPC25Q9HBM1 224 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 PRDM5Q9NQX1 630 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-207ENST00000578502 STARD7Q9NQZ5 370 aa12.18□□□□□ -0.46
ERBB2-207ENST00000578502 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 LOC102724159A0A0B4J2E5 919 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 MOXD2PA6NHM9 499 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 RBAK-RBAKDNI3L0D1 243 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 MEIS2O14770 477 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 ITGB8P26012 769 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 NKX3-2P78367 333 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
ERBB2-207ENST00000578502 PGM5Q15124 567 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 PWP2Q15269 919 aaKnown RBP12.17□□□□□ -0.46
ERBB2-207ENST00000578502 STXBP2Q15833 593 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 UBE2SQ16763 222 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 CCDC62Q6P9F0 684 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 VTI1AQ96AJ9 217 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 IWS1Q96ST2 819 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 GDF15Q99988 308 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 BCAS3Q9H6U6 928 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
ERBB2-207ENST00000578502 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
ERBB2-207ENST00000578502 V9GY48 417 aaPredicted RBP12.17□□□□□ -0.46
ERBB2-207ENST00000578502 LTBP2Q14767 1821 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 ADAMTS3O15072 1205 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 DTNBO60941 627 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 MYL3P08590 195 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 METAP2P50579 478 aaKnown RBP eCLIP12.16□□□□□ -0.46
ERBB2-207ENST00000578502 CDK7P50613 346 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 C1orf53Q5VUE5 145 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 RUFY3Q7L099 469 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 VSIG10LQ86VR7 867 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 PCSK9Q8NBP7 692 aaKnown RBP12.16□□□□□ -0.46
ERBB2-207ENST00000578502 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
ERBB2-207ENST00000578502 GLT1D1Q96MS3 346 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms