RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 PMLP29590 882 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 KCNC1P48547 511 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 SCRN1Q12765 414 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 MBLAC2Q68D91 279 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 LIPIQ6XZB0 460 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 FRMD5Q7Z6J6 570 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 ADGRG2Q8IZP9 1017 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 BVESQ8NE79 360 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 CPA5Q8WXQ8 436 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 MMP19Q99542 508 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 BCAS3Q9H6U6 928 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 GPRC5CQ9NQ84 441 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 CLEC1BQ9P126 229 aa4.47□□□□□ -1.69
CDH8-204ENST00000577536 NOP56O00567 594 aaKnown RBP4.46□□□□□ -1.7
CDH8-204ENST00000577536 FUCA1P04066 466 aa4.46□□□□□ -1.7
CDH8-204ENST00000577536 CACNB2Q08289 660 aaPredicted RBP4.46□□□□□ -1.7
CDH8-204ENST00000577536 ERICH6BQ5W0A0 696 aa4.46□□□□□ -1.7
CDH8-204ENST00000577536 GTF2IRD2BQ6EKJ0 949 aa4.46□□□□□ -1.7
CDH8-204ENST00000577536 GTF2IRD2Q86UP8 949 aa4.46□□□□□ -1.7
CDH8-204ENST00000577536 TRIM59Q8IWR1 403 aa4.46□□□□□ -1.7
CDH8-204ENST00000577536 PLEKHO2Q8TD55 490 aa4.46□□□□□ -1.7
CDH8-204ENST00000577536 ZNF526Q8TF50 670 aaPredicted RBP4.46□□□□□ -1.7
CDH8-204ENST00000577536 MRGPRX3Q96LB0 322 aa4.46□□□□□ -1.7
CDH8-204ENST00000577536 ADAM7Q9H2U9 754 aa4.46□□□□□ -1.7
CDH8-204ENST00000577536 A0A1B0GTL3 188 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 NTRK1P04629 796 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 THBDP07204 575 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 CELA3BP08861 270 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 DLX2Q07687 328 aaPredicted RBP4.45□□□□□ -1.7
CDH8-204ENST00000577536 SKOR2Q2VWA4 1001 aaPredicted RBP4.45□□□□□ -1.7
CDH8-204ENST00000577536 SMARCC2Q8TAQ2 1214 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 DPF3Q92784 378 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 PPP1R14AQ96A00 147 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 SPATA25Q9BR10 227 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 NKX2-4Q9H2Z4 354 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 CAPN10Q9HC96 672 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 CYP26B1Q9NR63 512 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 SIT1Q9Y3P8 196 aa4.45□□□□□ -1.7
CDH8-204ENST00000577536 SMAD7O15105 426 aaKnown RBP4.44□□□□□ -1.7
CDH8-204ENST00000577536 KRTAP1-1Q07627 177 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 INF2Q27J81 1249 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 C6orf15Q6UXA7 325 aaPredicted RBP4.44□□□□□ -1.7
CDH8-204ENST00000577536 DCP2Q8IU60 420 aaKnown RBP4.44□□□□□ -1.7
CDH8-204ENST00000577536 NPLOC4Q8TAT6 608 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 FRS2Q8WU20 508 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 NOX5Q96PH1 765 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 LGR4Q9BXB1 951 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 ACTR10Q9NZ32 417 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 MARCH2Q9P0N8 246 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 MRVI1Q9Y6F6 885 aa4.44□□□□□ -1.7
CDH8-204ENST00000577536 TBX1O43435 398 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 ERCC5P28715 1186 aaPredicted RBP4.43□□□□□ -1.7
CDH8-204ENST00000577536 CYP4F3Q08477 520 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 TNNI3KQ59H18 835 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 NT5DC1Q5TFE4 455 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 LARP1BQ659C4 914 aaKnown RBP4.43□□□□□ -1.7
CDH8-204ENST00000577536 IQCEQ6IPM2 695 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 PRRT2Q7Z6L0 340 aaPredicted RBP4.43□□□□□ -1.7
CDH8-204ENST00000577536 VPS37DQ86XT2 251 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 TEX2Q8IWB9 1127 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 CARFQ8N187 725 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 AP5M1Q9H0R1 490 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 SPATA6Q9NWH7 488 aaPredicted RBP4.43□□□□□ -1.7
CDH8-204ENST00000577536 BTG4Q9NY30 223 aa4.43□□□□□ -1.7
CDH8-204ENST00000577536 B2RBV5 119 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 C22orf46C9J442 243 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 SGSM2O43147 1006 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 PRICKLE3O43900 615 aaPredicted RBP4.42□□□□□ -1.7
CDH8-204ENST00000577536 SSBP05455 408 aaKnown RBP eCLIP4.42□□□□□ -1.7
CDH8-204ENST00000577536 ITGAVP06756 1048 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 C8BP07358 591 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 CYP2C8P10632 490 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 RPL11P62913 178 aaKnown RBP4.42□□□□□ -1.7
CDH8-204ENST00000577536 SV2CQ496J9 727 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 ZFYVE27Q5T4F4 411 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 E4F1Q66K89 784 aaPredicted RBP4.42□□□□□ -1.7
CDH8-204ENST00000577536 DBX2Q6ZNG2 339 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 ZNF227Q86WZ6 799 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 FAM178BQ8IXR5 827 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 BTN2A2Q8WVV5 523 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 ZBTB8AQ96BR9 441 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 DDX11Q96FC9 970 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 USP40Q9NVE5 1235 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 NTMQ9P121 344 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 PRKAG3Q9UGI9 489 aa4.42□□□□□ -1.7
CDH8-204ENST00000577536 ARNTLO00327 626 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 SUSD5O60279 629 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 NOBOXO60393 691 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 SCG5P05408 212 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 FPR2P25090 351 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 HOXC12P31275 282 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 SLC6A11P48066 632 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 SARSP49591 514 aaKnown RBP4.41□□□□□ -1.7
CDH8-204ENST00000577536 SMAD4Q13485 552 aaKnown RBP4.41□□□□□ -1.7
CDH8-204ENST00000577536 RTP5Q14D33 572 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 UBXN11Q5T124 520 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 MROH9Q5TGP6 573 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 ETV3LQ6ZN32 361 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 TTLL7Q6ZT98 887 aa4.41□□□□□ -1.7
CDH8-204ENST00000577536 MIB1Q86YT6 1006 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms