RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 Q4G0T1 1027 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 KRBA2Q6ZNG9 492 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 FCHSD1Q86WN1 690 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 GAS2L3Q86XJ1 694 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 FUCA2Q9BTY2 467 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 CCSER1Q9C0I3 900 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 RNF146Q9NTX7 359 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 HOOK1Q9UJC3 728 aaKnown RBP17.14■□□□□ 0.33
IFT20-204ENST00000577498 ZNF214Q9UL59 606 aaPredicted RBP17.14■□□□□ 0.33
IFT20-204ENST00000577498 SRCAPQ6ZRS2 3230 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 A0A0G2JMZ2 1700 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 RBBP6Q7Z6E9 1792 aaKnown RBP17.13■□□□□ 0.33
IFT20-204ENST00000577498 UTRNP46939 3433 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 POLR2DO15514 142 aaKnown RBP17.13■□□□□ 0.33
IFT20-204ENST00000577498 GJA5P36382 358 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 IRX3P78415 501 aaPredicted RBP17.13■□□□□ 0.33
IFT20-204ENST00000577498 PDIA5Q14554 519 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 TMEM132BQ14DG7 1078 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 MUM1L1Q5H9M0 696 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
IFT20-204ENST00000577498 USP49Q70CQ1 688 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 EPSTI1Q96J88 318 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 RAB34Q9BZG1 259 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 RPTORQ8N122 1335 aa17.13■□□□□ 0.33
IFT20-204ENST00000577498 ITGBL1O95965 494 aaPredicted RBP17.12■□□□□ 0.33
IFT20-204ENST00000577498 OSBPP22059 807 aa17.12■□□□□ 0.33
IFT20-204ENST00000577498 STAT3P40763 770 aa17.12■□□□□ 0.33
IFT20-204ENST00000577498 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
IFT20-204ENST00000577498 L1TD1Q5T7N2 865 aaKnown RBP17.12■□□□□ 0.33
IFT20-204ENST00000577498 SLFN12Q8IYM2 578 aa17.12■□□□□ 0.33
IFT20-204ENST00000577498 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
IFT20-204ENST00000577498 CNNM3Q8NE01 707 aa17.12■□□□□ 0.33
IFT20-204ENST00000577498 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
IFT20-204ENST00000577498 SLC45A1Q9Y2W3 748 aa17.12■□□□□ 0.33
IFT20-204ENST00000577498 FRMPD4Q14CM0 1322 aa17.12■□□□□ 0.33
IFT20-204ENST00000577498 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
IFT20-204ENST00000577498 SLC26A4O43511 780 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 ACTN4O43707 911 aaKnown RBP17.11■□□□□ 0.33
IFT20-204ENST00000577498 SLFN14P0C7P3 912 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 ZNF76P36508 570 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 UBA7P41226 1012 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 MRE11P49959 708 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 GTF2A2P52657 109 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 LONRF3Q496Y0 759 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 GPAT2Q6NUI2 795 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 CKAP2LQ8IYA6 745 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 IQUBQ8NA54 791 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 SYTL5Q8TDW5 730 aaPredicted RBP17.11■□□□□ 0.33
IFT20-204ENST00000577498 GTF3C2Q8WUA4 911 aaPredicted RBP17.11■□□□□ 0.33
IFT20-204ENST00000577498 HAS1Q92839 578 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
IFT20-204ENST00000577498 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
IFT20-204ENST00000577498 MARCH6O60337 910 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
IFT20-204ENST00000577498 CETPP11597 493 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 COPB2P35606 906 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 TXKP42681 527 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 RPS6P62753 249 aaKnown RBP17.1■□□□□ 0.33
IFT20-204ENST00000577498 TYRO3Q06418 890 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 RIOX2Q8IUF8 465 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 ZNF526Q8TF50 670 aaPredicted RBP17.1■□□□□ 0.33
IFT20-204ENST00000577498 FAM20AQ96MK3 541 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 KIAA1468Q9P260 1216 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 FBXO40Q9UH90 709 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 SERTAD1Q9UHV2 236 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 PNMA3Q9UL41 463 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 RIPK3Q9Y572 518 aa17.1■□□□□ 0.33
IFT20-204ENST00000577498 A0A087X0B3 334 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 CAVIN2O95810 425 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 TECP42680 631 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 HERVK_113P62684 666 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 SETQ01105 290 aaPredicted RBP17.09■□□□□ 0.33
IFT20-204ENST00000577498 E2F4Q16254 413 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 PRR16Q569H4 304 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 XRRA1Q6P2D8 792 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 NIPA1Q7RTP0 329 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 CABP7Q86V35 215 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 CEP57L1Q8IYX8 460 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 PDILTQ8N807 584 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 LENG9Q96B70 501 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 CUEDC2Q9H467 287 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
IFT20-204ENST00000577498 GRPEL1Q9HAV7 217 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 COL20A1Q9P218 1284 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 STK24Q9Y6E0 443 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 TRPM7Q96QT4 1865 aa17.09■□□□□ 0.33
IFT20-204ENST00000577498 IGLV3-22A0A075B6J6 115 aa17.08■□□□□ 0.32
IFT20-204ENST00000577498 FAM86B1E9PN63 330 aa17.08■□□□□ 0.32
IFT20-204ENST00000577498 FAM86B2P0C5J1 330 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms