RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 EFCAB14O75071 495 aa15.73■□□□□ 0.11
COPS3-214ENST00000577246 TXNP10599 105 aaKnown RBP15.73■□□□□ 0.11
COPS3-214ENST00000577246 TOP1P11387 765 aaKnown RBP15.73■□□□□ 0.11
COPS3-214ENST00000577246 EDNRBP24530 442 aa15.73■□□□□ 0.11
COPS3-214ENST00000577246 SLC16A2P36021 539 aa15.73■□□□□ 0.11
COPS3-214ENST00000577246 PTGISQ16647 500 aa15.73■□□□□ 0.11
COPS3-214ENST00000577246 KRT40Q6A162 431 aa15.73■□□□□ 0.11
COPS3-214ENST00000577246 SLC30A10Q6XR72 485 aa15.73■□□□□ 0.11
COPS3-214ENST00000577246 ANAPC4Q9UJX5 808 aa15.73■□□□□ 0.11
COPS3-214ENST00000577246 WDR19Q8NEZ3 1342 aa15.72■□□□□ 0.11
COPS3-214ENST00000577246 ORC4O43929 436 aa15.72■□□□□ 0.11
COPS3-214ENST00000577246 WDR5P61964 334 aaKnown RBP15.72■□□□□ 0.11
COPS3-214ENST00000577246 RPS6P62753 249 aaKnown RBP15.72■□□□□ 0.11
COPS3-214ENST00000577246 CTDSPL2Q05D32 466 aa15.72■□□□□ 0.11
COPS3-214ENST00000577246 CNKSR3Q6P9H4 555 aa15.72■□□□□ 0.11
COPS3-214ENST00000577246 SESTD1Q86VW0 696 aa15.72■□□□□ 0.11
COPS3-214ENST00000577246 MAF1Q9H063 256 aa15.72■□□□□ 0.11
COPS3-214ENST00000577246 TOMM22Q9NS69 142 aa15.72■□□□□ 0.11
COPS3-214ENST00000577246 SELPP16109 830 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 CHMP4BP1P59074 171 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 TTBK2Q6IQ55 1244 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 LRRC8DQ7L1W4 858 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 RASGRP2Q7LDG7 609 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 CLEC4DQ8WXI8 215 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 CRBNQ96SW2 442 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 RCAN3Q9UKA8 241 aa15.71■□□□□ 0.11
COPS3-214ENST00000577246 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
COPS3-214ENST00000577246 ABHD14A-ACY1A0A1B0GW23 586 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 PI4K2BG5E9Z4 385 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 LPXNO60711 386 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 ARHGEF15O94989 841 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 RGS22Q8NE09 1264 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 TGS1Q96RS0 853 aaKnown RBP15.7■□□□□ 0.1
COPS3-214ENST00000577246 RAD9AQ99638 391 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 TMEM47Q9BQJ4 181 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 KATNAL1Q9BW62 490 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 TCP11L1Q9NUJ3 509 aa15.7■□□□□ 0.1
COPS3-214ENST00000577246 GJB5O95377 273 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 GH1P01241 217 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 FGRP09769 529 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 PDHBP11177 359 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 CASTP20810 708 aaKnown RBP15.69■□□□□ 0.1
COPS3-214ENST00000577246 RBL2Q08999 1139 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 PI4K2BQ8TCG2 481 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 GDPD5Q8WTR4 605 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 COPS5Q92905 334 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 UBE2ZQ9H832 354 aaPredicted RBP15.69■□□□□ 0.1
COPS3-214ENST00000577246 TANC1Q9C0D5 1861 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 TCF20Q9UGU0 1960 aaKnown RBP15.69■□□□□ 0.1
COPS3-214ENST00000577246 SCN10AQ9Y5Y9 1956 aa15.69■□□□□ 0.1
COPS3-214ENST00000577246 PRRC2BQ5JSZ5 2229 aaKnown RBP15.68■□□□□ 0.1
COPS3-214ENST00000577246 TRANK1O15050 2925 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 CXCL10P02778 98 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 MMP3P08254 477 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 ERVK-21P61565 698 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 IKBKEQ14164 716 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 ALX1Q15699 326 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 DGKDQ16760 1214 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 RRP12Q5JTH9 1297 aaKnown RBP15.68■□□□□ 0.1
COPS3-214ENST00000577246 GPATCH4Q5T3I0 446 aaKnown RBP15.68■□□□□ 0.1
COPS3-214ENST00000577246 C7orf31Q8N865 590 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 AFG1LQ8WV93 481 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 TTC14Q96N46 770 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 INCENPQ9NQS7 918 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 CTNNA3Q9UI47 895 aa15.68■□□□□ 0.1
COPS3-214ENST00000577246 LCHNA4D1U4 455 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 PRR33A8MZF0 331 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 FOXP2O15409 715 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 PCP11498 1178 aaKnown RBP15.67■□□□□ 0.1
COPS3-214ENST00000577246 CKBP12277 381 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 MX1P20591 662 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 ZNF543Q08ER8 600 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 PUS10Q3MIT2 529 aaKnown RBP15.67■□□□□ 0.1
COPS3-214ENST00000577246 LEXMQ3ZCV2 418 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 GDF6Q6KF10 455 aaPredicted RBP15.67■□□□□ 0.1
COPS3-214ENST00000577246 NSUN6Q8TEA1 469 aaKnown RBP15.67■□□□□ 0.1
COPS3-214ENST00000577246 PPP1R13LQ8WUF5 828 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 SUGCTQ9HAC7 445 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
COPS3-214ENST00000577246 GTF2IRD1Q9UHL9 959 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
COPS3-214ENST00000577246 LCTP09848 1927 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 REV3LO60673 3130 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 ARIH2O95376 493 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 ALADP13716 330 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 DEFB103AP81534 67 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 PTK7Q13308 1070 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 STXBP2Q15833 593 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 C20orf194Q5TEA3 1177 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 CCDC62Q6P9F0 684 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 MCF2L2Q86YR7 1114 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 MIER1Q8N108 512 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 GJD3Q8N144 294 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 IWS1Q96ST2 819 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 C11orf16Q9NQ32 467 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 HELLSQ9NRZ9 838 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 INSL6Q9Y581 213 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 EMSYQ7Z589 1322 aa15.66■□□□□ 0.1
COPS3-214ENST00000577246 SCN5AQ14524 2016 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms