RNA–Protein interactions for RNA: ENST00000577185.1

TTC39C-204, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3 BASIC

Gene TTC39C, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-204ENST00000577185 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 FAM83BQ5T0W9 1011 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 CTR9Q6PD62 1173 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 ALYREFQ86V81 257 aaKnown RBP8.18□□□□□ -1.1
TTC39C-204ENST00000577185 SIRT2Q8IXJ6 389 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 NUP133Q8WUM0 1156 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 DDX11Q96FC9 970 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 RNPC3Q96LT9 517 aaKnown RBP8.18□□□□□ -1.1
TTC39C-204ENST00000577185 SLF1Q9BQI6 1058 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 ZBTB40Q9NUA8 1239 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 TMEM39AQ9NV64 488 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 ARPP21Q9UBL0 812 aaPredicted RBP8.18□□□□□ -1.1
TTC39C-204ENST00000577185 ZNF214Q9UL59 606 aaPredicted RBP8.18□□□□□ -1.1
TTC39C-204ENST00000577185 FAM184BQ9ULE4 1060 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 PCDHGC3Q9UN70 934 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
TTC39C-204ENST00000577185 SZT2Q5T011 3432 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 A0A1W2PQ45 241 aaPredicted RBP8.17□□□□□ -1.1
TTC39C-204ENST00000577185 A0A1W2PQY0 241 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 MOXD2PA6NHM9 499 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 PQBP1O60828 265 aaKnown RBP8.17□□□□□ -1.1
TTC39C-204ENST00000577185 ADAMTS4O75173 837 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 TAL1P17542 331 aaPredicted RBP8.17□□□□□ -1.1
TTC39C-204ENST00000577185 ITGB8P26012 769 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 ACLYP53396 1101 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 FPGSQ05932 587 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 SBK1Q52WX2 424 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 ANKRD33Q7Z3H0 272 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 PRPF38AQ8NAV1 312 aaKnown RBP8.17□□□□□ -1.1
TTC39C-204ENST00000577185 REPS2Q8NFH8 660 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 MYLIPQ8WY64 445 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 TOX2Q96NM4 488 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 TEX13BQ9BXU2 312 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 KRTAP4-7Q9BYR0 210 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 PUS7LQ9H0K6 701 aaKnown RBP8.17□□□□□ -1.1
TTC39C-204ENST00000577185 TTYH1Q9H313 450 aaPredicted RBP8.17□□□□□ -1.1
TTC39C-204ENST00000577185 MKNK2Q9HBH9 465 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 STARD7Q9NQZ5 370 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 NYAP2Q9P242 653 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 CTDP1Q9Y5B0 961 aaPredicted RBP8.17□□□□□ -1.1
TTC39C-204ENST00000577185 ZBED9Q6R2W3 1325 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 ROBO3Q96MS0 1386 aa8.17□□□□□ -1.1
TTC39C-204ENST00000577185 DNAJC25-GNG10A0A024R161 153 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 A0A0G2JMZ2 1700 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.16□□□□□ -1.1
TTC39C-204ENST00000577185 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.16□□□□□ -1.1
TTC39C-204ENST00000577185 F5H6K3 240 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 ATP2A1O14983 1001 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 ZBED4O75132 1171 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 CHGBP05060 677 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 FDX1P10109 184 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 FOSL2P15408 326 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 RASA1P20936 1047 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 FSHRP23945 695 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 EPHB4P54760 987 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 KLRC3Q07444 240 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 FAAP100Q0VG06 881 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 KCNA10Q16322 511 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 FRMPD3Q5JV73 1810 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 SNRNP48Q6IEG0 339 aaKnown RBP8.16□□□□□ -1.1
TTC39C-204ENST00000577185 GIMAP6Q6P9H5 292 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 MAMDC4Q6UXC1 1216 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 CPXCR1Q8N123 301 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 KLHDC9Q8NEP7 349 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 NAV1Q8NEY1 1877 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 GLT1D1Q96MS3 346 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 SYNGAP1Q96PV0 1343 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 STRBPQ96SI9 672 aaKnown RBP8.16□□□□□ -1.1
TTC39C-204ENST00000577185 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.16□□□□□ -1.1
TTC39C-204ENST00000577185 LRRCC1Q9C099 1032 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 SPC25Q9HBM1 224 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 GOLGA2P5Q9HBQ8 144 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 ZNF287Q9HBT7 754 aa8.16□□□□□ -1.1
TTC39C-204ENST00000577185 ELP1O95163 1332 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 MROH7Q68CQ1 1323 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 SYNRGQ9UMZ2 1314 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 GSG1L2A8MUP6 293 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 MINDY4BA8MYZ0 360 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 DUSP11O75319 330 aaKnown RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 SNAI1O95863 264 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 NDUFB10O96000 172 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 TIMP1P01033 207 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 CST5P28325 142 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 ACVR2BQ13705 512 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 CCSAPQ6IQ19 270 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 CCDC174Q6PII3 467 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 ZNF444Q8N0Y2 327 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 STK11IPQ8N1F8 1099 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 PCSK9Q8NBP7 692 aaKnown RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 CHST13Q8NET6 341 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 ACDQ96AP0 544 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 LENG1Q96BZ8 264 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 NUP88Q99567 741 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 CLIP2Q9UDT6 1046 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 FBXO40Q9UH90 709 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 FEM1BQ9UK73 627 aa8.15□□□□□ -1.1
TTC39C-204ENST00000577185 ZHX1Q9UKY1 873 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-204ENST00000577185 RLFQ13129 1914 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms