RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 COA7Q96BR5 231 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 RHOXF2Q9BQY4 288 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 SLC39A2Q9NP94 309 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 LRRC4BQ9NT99 713 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 RCCD1A6NED2 376 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 H3BQF6 201 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 TDP2O95551 362 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 GYS1P13807 737 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 HOXA7P31268 230 aaPredicted RBP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 PDIA5Q14554 519 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 MCM6Q14566 821 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 VWA3BQ502W6 1294 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 FKBP15Q5T1M5 1219 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 PPP1R18Q6NYC8 613 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 WDR93Q6P2C0 686 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 KIAA1328Q86T90 577 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 EHBP1Q8NDI1 1231 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 EEF2KMTQ96G04 330 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 PURBQ96QR8 312 aaKnown RBP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 GBP3Q9H0R5 595 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 HDAC6Q9UBN7 1215 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 USP21Q9UK80 565 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 LTBP1Q14766 1721 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 ABCB11O95342 1321 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 C10orf71Q711Q0 1435 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 CCDC66A2RUB6 948 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 KRT86O43790 486 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 AKR1B1P15121 316 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 HNRNPH3P31942 346 aaKnown RBP9.97□□□□□ -0.81
NCBP3-204ENST00000574911 TMEM266Q2M3C6 531 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 TMEM119Q4V9L6 283 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 LARP4BQ92615 738 aaKnown RBP9.97□□□□□ -0.81
NCBP3-204ENST00000574911 RAD54LQ92698 747 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 PCMTD1Q96MG8 357 aaPredicted RBP9.97□□□□□ -0.81
NCBP3-204ENST00000574911 LACRTQ9GZZ8 138 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 SIK3Q9Y2K2 1263 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 SAR1BQ9Y6B6 198 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 ENC1O14682 589 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
NCBP3-204ENST00000574911 EHHADHQ08426 723 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 LRRC47Q8N1G4 583 aaKnown RBP9.97□□□□□ -0.81
NCBP3-204ENST00000574911 GUF1Q8N442 669 aaKnown RBP9.97□□□□□ -0.81
NCBP3-204ENST00000574911 CRAMP1Q96RY5 1269 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 RIC8AQ9NPQ8 531 aa9.97□□□□□ -0.81
NCBP3-204ENST00000574911 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 ERICH4A6NGS2 130 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 USP14P54578 494 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 FOXR2Q6PJQ5 311 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 DPP8Q6V1X1 898 aaPredicted RBP9.96□□□□□ -0.81
NCBP3-204ENST00000574911 NUDT12Q9BQG2 462 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 RAB34Q9BZG1 259 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 JMJD4Q9H9V9 463 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 GPCPD1Q9NPB8 672 aa9.96□□□□□ -0.81
NCBP3-204ENST00000574911 PNMA6FA0A0J9YX94 578 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 ZNF263O14978 683 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 PPP1R11O60927 126 aaPredicted RBP9.96□□□□□ -0.82
NCBP3-204ENST00000574911 FGFR1OPO95684 399 aaKnown RBP9.96□□□□□ -0.82
NCBP3-204ENST00000574911 VAV2P52735 878 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 ZNF543Q08ER8 600 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 PSMD2Q13200 908 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 PICALMQ13492 652 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 MAN2A1Q16706 1144 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 CDK5RAP3Q96JB5 506 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 MMS19Q96T76 1030 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 TSGA10Q9BZW7 698 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 LRRC27Q9C0I9 530 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 NDST4Q9H3R1 872 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 PDE11AQ9HCR9 933 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 PLAGL2Q9UPG8 496 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 SUGT1Q9Y2Z0 365 aa9.96□□□□□ -0.82
NCBP3-204ENST00000574911 MYO3BQ8WXR4 1341 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 QSER1Q2KHR3 1735 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 UBR3Q6ZT12 1888 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 ANO9A1A5B4 782 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 KLRG2A4D1S0 409 aaPredicted RBP9.95□□□□□ -0.82
NCBP3-204ENST00000574911 POTEMA6NI47 508 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 C6orf229H3BNL8 230 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 SRGAP2O75044 1071 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 TTLL1O95922 423 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 GTF2IP78347 998 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 LRRC63Q05C16 580 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 CKAP4Q07065 602 aaKnown RBP9.95□□□□□ -0.82
NCBP3-204ENST00000574911 KRT79Q5XKE5 535 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 DYMQ7RTS9 669 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 KCNK18Q7Z418 384 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 ADGRF4Q8IZF3 695 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 SNX29Q8TEQ0 813 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 RPGRIP1Q96KN7 1286 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 SUGCTQ9HAC7 445 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 DDX4Q9NQI0 724 aaKnown RBP9.95□□□□□ -0.82
NCBP3-204ENST00000574911 PSD3Q9NYI0 1048 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 SWAP70Q9UH65 585 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 EIF3JO75822 258 aaKnown RBP9.95□□□□□ -0.82
NCBP3-204ENST00000574911 IPO7O95373 1038 aaKnown RBP9.95□□□□□ -0.82
NCBP3-204ENST00000574911 LCA5LO95447 670 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 EIF6P56537 245 aaKnown RBP9.95□□□□□ -0.82
NCBP3-204ENST00000574911 GPS2Q13227 327 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 CASP8Q14790 479 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms