RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 CDK5RAP3Q96JB5 506 aa26.52■■□□□ 1.84
NPLOC4-217ENST00000574897 PANX2Q96RD6 677 aa26.52■■□□□ 1.84
NPLOC4-217ENST00000574897 RBM26Q5T8P6 1007 aaKnown RBP26.51■■□□□ 1.84
NPLOC4-217ENST00000574897 SV2BQ7L1I2 683 aa26.51■■□□□ 1.84
NPLOC4-217ENST00000574897 CDAN1Q8IWY9 1227 aa26.51■■□□□ 1.84
NPLOC4-217ENST00000574897 LARP4BQ92615 738 aaKnown RBP26.51■■□□□ 1.84
NPLOC4-217ENST00000574897 SPDYE2BA6NHP3 402 aa26.51■■□□□ 1.83
NPLOC4-217ENST00000574897 SPDYE6P0CI01 402 aa26.51■■□□□ 1.83
NPLOC4-217ENST00000574897 ECE1P42892 770 aa26.51■■□□□ 1.83
NPLOC4-217ENST00000574897 RSBN1LQ6PCB5 846 aaPredicted RBP26.51■■□□□ 1.83
NPLOC4-217ENST00000574897 PDCL3Q9H2J4 239 aa26.51■■□□□ 1.83
NPLOC4-217ENST00000574897 SLC39A2Q9NP94 309 aa26.51■■□□□ 1.83
NPLOC4-217ENST00000574897 A0A0U1RQJ8 604 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 MEIS2O14770 477 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 CCP110O43303 1012 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 PDIA5Q14554 519 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 ANKRD40Q6AI12 368 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 LARGE2Q8N3Y3 721 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 ATRIPQ8WXE1 791 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 ANO3Q9BYT9 981 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 NKRFO15226 690 aaKnown RBP eCLIP26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 ZSCAN12O43309 604 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 UBXN1Q04323 297 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 CCDC93Q567U6 631 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 GMCL1P1Q8NEA9 526 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 ANKRD20A12PQ8NF67 263 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 ANKRD7Q92527 254 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 ITIH6Q6UXX5 1313 aa26.5■■□□□ 1.83
NPLOC4-217ENST00000574897 DPEP1P16444 411 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 KCNA3P22001 575 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 AMPD3Q01432 767 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 KRT79Q5XKE5 535 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 LRRN4CLQ8ND94 238 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 MARCH6O60337 910 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 KIAA1755Q5JYT7 1200 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 P2RX5Q93086 422 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 RAB34Q9BZG1 259 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 MRPL44Q9H9J2 332 aaKnown RBP26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 STK17AQ9UEE5 414 aa26.49■■□□□ 1.83
NPLOC4-217ENST00000574897 PES1O00541 588 aaKnown RBP26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 CSGALNACT2Q8N6G5 542 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 RAD54LQ92698 747 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 DHTKD1Q96HY7 919 aaPredicted RBP26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 CCNE1P24864 410 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 TMEM119Q4V9L6 283 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 SYDE2Q5VT97 1194 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 ACER1Q8TDN7 264 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 CCDC47Q96A33 483 aaKnown RBP26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 GMCL1Q96IK5 515 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 GMLQ99445 158 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 THAP9Q9H5L6 903 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 ZNF70Q9UC06 446 aaPredicted RBP26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 PCDHA12Q9UN75 941 aa26.48■■□□□ 1.83
NPLOC4-217ENST00000574897 BMP3P12645 472 aa26.47■■□□□ 1.83
NPLOC4-217ENST00000574897 GLIS3Q8NEA6 775 aa26.47■■□□□ 1.83
NPLOC4-217ENST00000574897 AMNQ9BXJ7 453 aa26.47■■□□□ 1.83
NPLOC4-217ENST00000574897 CNTNAP1P78357 1384 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 FBXO11Q86XK2 927 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 WDR24Q96S15 920 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 SEMA6BQ9H3T3 888 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 TMOD2Q9NZR1 351 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 VIL1P09327 827 aaKnown RBP26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 IDEP14735 1019 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 STAT3P40763 770 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 DLGAP5Q15398 846 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 L2HGDHQ9H9P8 463 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 VEZTQ9HBM0 779 aa26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 COL2A1P02458 1487 aaPredicted RBP26.46■■□□□ 1.83
NPLOC4-217ENST00000574897 GCFC2P16383 781 aaKnown RBP26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 CNNM4Q6P4Q7 775 aa26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 CNGA4Q8IV77 575 aa26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 MB21D1Q8N884 522 aa26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 DDX12PQ92771 950 aa26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 IRX2Q9BZI1 471 aaPredicted RBP26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 ABHD10Q9NUJ1 306 aa26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 SCAF8Q9UPN6 1271 aaKnown RBP26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.45■■□□□ 1.822e-7■■□□□ 13.1
NPLOC4-217ENST00000574897 PHLPP2Q6ZVD8 1323 aa26.45■■□□□ 1.82
NPLOC4-217ENST00000574897 LGALS16A8MUM7 142 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 B4DLN1 442 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 OPLAHO14841 1288 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 EEF1GP26641 437 aaKnown RBP26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 ERVK-24P63145 666 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 SEMA3FQ13275 785 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 UNC13DQ70J99 1090 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 ZNF507Q8TCN5 953 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 SLU7O95391 586 aaKnown RBP26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 PRKCSHP14314 528 aaPredicted RBP26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 HOXA13P31271 388 aaPredicted RBP26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 RTKN2Q8IZC4 609 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 PSMD1Q99460 953 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 ADGRG1Q9Y653 693 aa26.44■■□□□ 1.82
NPLOC4-217ENST00000574897 CNOT6LQ96LI5 555 aaKnown RBP26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 TUBGCP2Q9BSJ2 902 aa26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 TMEM39BQ9GZU3 492 aa26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 MAGEC2Q9UBF1 373 aaPredicted RBP26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 PRR12Q9ULL5 1215 aa26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 E9PMD0 336 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms