RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 TRIM43BA6NCK2 446 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 MOXD2PA6NHM9 499 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 ASGR1P07306 291 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 SMPD1P17405 629 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 CST5P28325 142 aaPredicted RBP11.64□□□□□ -0.55
RPA1-206ENST00000573994 GJA9P57773 515 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 LSM11P83369 360 aaKnown RBP eCLIP11.64□□□□□ -0.55
RPA1-206ENST00000573994 WTAPQ15007 396 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 TMEM67Q5HYA8 995 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 GNASQ5JWF2 1037 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 CCSAPQ6IQ19 270 aaPredicted RBP11.64□□□□□ -0.55
RPA1-206ENST00000573994 KIAA1211Q6ZU35 1233 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
RPA1-206ENST00000573994 NCOA7Q8NI08 942 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 MAP4K1Q92918 833 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 TRIM43Q96BQ3 446 aaPredicted RBP11.64□□□□□ -0.55
RPA1-206ENST00000573994 LBHD1Q9BQE6 289 aaPredicted RBP11.64□□□□□ -0.55
RPA1-206ENST00000573994 MAF1Q9H063 256 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 VTA1Q9NP79 307 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 ANO2Q9NQ90 1003 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 ADD3Q9UEY8 706 aaKnown RBP11.64□□□□□ -0.55
RPA1-206ENST00000573994 MAD2L2Q9UI95 211 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 ABCB11O95342 1321 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 MCM3APO60318 1980 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 ERICH2A1L162 156 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 CTAGE5O15320 804 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
RPA1-206ENST00000573994 BMP8BP34820 402 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 PDE4DQ08499 809 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 COL9A3Q14050 684 aaPredicted RBP11.63□□□□□ -0.55
RPA1-206ENST00000573994 SLC35G1Q2M3R5 365 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 TAPT1Q6NXT6 567 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 FBXO11Q86XK2 927 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 HOMER1Q86YM7 354 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 TDHQ8IZJ6 230 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 MORC4Q8TE76 937 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 NUP133Q8WUM0 1156 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 GLT1D1Q96MS3 346 aa11.63□□□□□ -0.55
RPA1-206ENST00000573994 TSEN34Q9BSV6 310 aaKnown RBP11.63□□□□□ -0.55
RPA1-206ENST00000573994 GNEQ9Y223 722 aaKnown RBP11.63□□□□□ -0.55
RPA1-206ENST00000573994 LOC102724159A0A0B4J2E5 919 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 KLRF2D3W0D1 207 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 SLC27A2O14975 620 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 DYNC1LI2O43237 492 aaPredicted RBP11.62□□□□□ -0.55
RPA1-206ENST00000573994 PPP1R11O60927 126 aaPredicted RBP11.62□□□□□ -0.55
RPA1-206ENST00000573994 CLTBP09497 229 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 GRM4Q14833 912 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 SART3Q15020 963 aaKnown RBP11.62□□□□□ -0.55
RPA1-206ENST00000573994 PWP2Q15269 919 aaKnown RBP11.62□□□□□ -0.55
RPA1-206ENST00000573994 FSCN1Q16658 493 aaKnown RBP11.62□□□□□ -0.55
RPA1-206ENST00000573994 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 C1orf53Q5VUE5 145 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 CXCL17Q6UXB2 119 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 PCSK9Q8NBP7 692 aaKnown RBP11.62□□□□□ -0.55
RPA1-206ENST00000573994 SYTL5Q8TDW5 730 aaPredicted RBP11.62□□□□□ -0.55
RPA1-206ENST00000573994 PIBF1Q8WXW3 757 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 TBC1D5Q92609 795 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 BADQ92934 168 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 VTI1AQ96AJ9 217 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 MYL10Q9BUA6 226 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 AP5M1Q9H0R1 490 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 COL20A1Q9P218 1284 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 SMCHD1A6NHR9 2005 aa11.62□□□□□ -0.55
RPA1-206ENST00000573994 LAMA2P24043 3122 aaKnown RBP11.61□□□□□ -0.55
RPA1-206ENST00000573994 LTBP2Q14767 1821 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 A0A0U1RQG5 324 aaPredicted RBP11.61□□□□□ -0.55
RPA1-206ENST00000573994 PALM3A6NDB9 673 aaPredicted RBP11.61□□□□□ -0.55
RPA1-206ENST00000573994 PRC1O43663 620 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 EDNRBP24530 442 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 ITGB8P26012 769 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 CREB3L3Q68CJ9 461 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 CATIPQ7Z7H3 387 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 RAB11FIP4Q86YS3 637 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 CCDC136Q96JN2 1154 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 LRRC2Q9BYS8 371 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 LY9Q9HBG7 655 aa11.61□□□□□ -0.55
RPA1-206ENST00000573994 MRPL11Q9Y3B7 192 aaKnown RBP11.61□□□□□ -0.55
RPA1-206ENST00000573994 DCDC2CA8MYV0 355 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 OPLAHO14841 1288 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 CFBP00751 764 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 EIF2AK2P19525 551 aaKnown RBP11.6□□□□□ -0.55
RPA1-206ENST00000573994 PSMC6P62333 389 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 TROAPQ12815 778 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 PPP2R5BQ15173 497 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 DUSP28Q4G0W2 176 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 IQSEC1Q6DN90 963 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 CASC1Q6TDU7 716 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 NFXL1Q6ZNB6 911 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 ANKRD33Q7Z3H0 272 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 ZNF654Q8IZM8 581 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 DNERQ8NFT8 737 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 OR6J1Q8NGC5 347 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 IGDCC4Q8TDY8 1250 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 COPS5Q92905 334 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 TAAR1Q96RJ0 339 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 PIGSQ96S52 555 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 MPHOSPH6Q99547 160 aaKnown RBP11.6□□□□□ -0.55
RPA1-206ENST00000573994 AMNQ9BXJ7 453 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms