RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ARMCX2Q7L311 632 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
CHD3-216ENST00000573936 MORC4Q8TE76 937 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 NSUN6Q8TEA1 469 aaKnown RBP12.7□□□□□ -0.38
CHD3-216ENST00000573936 TBC1D5Q92609 795 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 FGD4Q96M96 766 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 IWS1Q96ST2 819 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 KIF2CQ99661 725 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 ABHD16BQ9H3Z7 469 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 C11orf49Q9H6J7 331 aa12.7□□□□□ -0.38
CHD3-216ENST00000573936 NCOA5Q9HCD5 579 aaKnown RBP12.7□□□□□ -0.38
CHD3-216ENST00000573936 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
CHD3-216ENST00000573936 ZNFX1Q9P2E3 1918 aaKnown RBP12.7□□□□□ -0.38
CHD3-216ENST00000573936 hCG_1642624A0A1W2PR95 340 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 OPLAHO14841 1288 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 SEPT4O43236 478 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 ST18O60284 1047 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 SNAI1O95863 264 aaPredicted RBP12.69□□□□□ -0.38
CHD3-216ENST00000573936 SCG2P13521 617 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 SYN1P17600 705 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 CCND3P30281 292 aaPredicted RBP12.69□□□□□ -0.38
CHD3-216ENST00000573936 ACVR2BQ13705 512 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 PFKFB3Q16875 520 aaPredicted RBP12.69□□□□□ -0.38
CHD3-216ENST00000573936 ARHGEF16Q5VV41 709 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
CHD3-216ENST00000573936 ZSCAN31Q96LW9 406 aaPredicted RBP12.69□□□□□ -0.38
CHD3-216ENST00000573936 GDF15Q99988 308 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 UBE2OQ9C0C9 1292 aaKnown RBP12.69□□□□□ -0.38
CHD3-216ENST00000573936 PSTPIP2Q9H939 334 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 FAM184BQ9ULE4 1060 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 LIMCH1Q9UPQ0 1083 aa12.69□□□□□ -0.38
CHD3-216ENST00000573936 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 DEXIO95424 95 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 ZNF865P0CJ78 1059 aaPredicted RBP12.68□□□□□ -0.38
CHD3-216ENST00000573936 AKR1A1P14550 325 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 NAPAP54920 295 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 PDE4DQ08499 809 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 SCRN1Q12765 414 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 WWC2Q6AWC2 1192 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 TRPV1Q8NER1 839 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 PHKBQ93100 1093 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 TAAR1Q96RJ0 339 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 RMDN3Q96TC7 470 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 DDX20Q9UHI6 824 aaKnown RBP12.68□□□□□ -0.38
CHD3-216ENST00000573936 ZHX1Q9UKY1 873 aaPredicted RBP12.68□□□□□ -0.38
CHD3-216ENST00000573936 STXBP5LQ9Y2K9 1186 aa12.68□□□□□ -0.38
CHD3-216ENST00000573936 STXBP3O00186 592 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 EDNRBP24530 442 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
CHD3-216ENST00000573936 MCM2P49736 904 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 STXBP2Q15833 593 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 PKN1Q16512 942 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 ME3Q16798 604 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 LRIT3Q3SXY7 679 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 IQSEC1Q6DN90 963 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 NOL8Q76FK4 1167 aaKnown RBP12.67□□□□□ -0.38
CHD3-216ENST00000573936 Q7L0L9 218 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 FAM177A1Q8N128 213 aaPredicted RBP12.67□□□□□ -0.38
CHD3-216ENST00000573936 CCDC148Q8NFR7 591 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 GPKOWQ92917 476 aaPredicted RBP eCLIP12.67□□□□□ -0.38
CHD3-216ENST00000573936 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
CHD3-216ENST00000573936 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 SH3GLB2Q9NR46 395 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 PXMP2Q9NR77 195 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 SH2B1Q9NRF2 756 aaPredicted RBP12.67□□□□□ -0.38
CHD3-216ENST00000573936 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
CHD3-216ENST00000573936 ASTN1O14525 1302 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 PLXNA1Q9UIW2 1896 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 MEIS2O14770 477 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 RARBP10826 455 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 XBP1P17861 261 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 GNA11P29992 359 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 MAGEA10P43363 369 aaPredicted RBP12.66□□□□□ -0.38
CHD3-216ENST00000573936 ADCY7P51828 1080 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 LHX8Q68G74 356 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 MCTP2Q6DN12 878 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 FCHSD1Q86WN1 690 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 BICD2Q8TD16 824 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 WASF1Q92558 559 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 C6orf50Q9HD87 102 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 COL20A1Q9P218 1284 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 MYH6P13533 1939 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 UNC80Q8N2C7 3258 aa12.66□□□□□ -0.38
CHD3-216ENST00000573936 STK36Q9NRP7 1315 aa12.65□□□□□ -0.38
CHD3-216ENST00000573936 ESYT2A0FGR8 921 aa12.65□□□□□ -0.38
CHD3-216ENST00000573936 SPDYE3A6NKU9 549 aa12.65□□□□□ -0.38
CHD3-216ENST00000573936 EIF3JO75822 258 aaKnown RBP12.65□□□□□ -0.38
CHD3-216ENST00000573936 FOSP01100 380 aaPredicted RBP12.65□□□□□ -0.38
CHD3-216ENST00000573936 NR3C2P08235 984 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms