RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 TMEM63BQ5T3F8 832 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 RNF207Q6ZRF8 634 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 CHST3Q7LGC8 479 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 DEFB123Q8N688 67 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 CTCFLQ8NI51 663 aaPredicted RBP13.71□□□□□ -0.21
NDE1-206ENST00000572967 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 CLEC4DQ8WXI8 215 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 VTI1AQ96AJ9 217 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 VTA1Q9NP79 307 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 TMEM39AQ9NV64 488 aa13.71□□□□□ -0.21
NDE1-206ENST00000572967 NAP1L2Q9ULW6 460 aaPredicted RBP13.71□□□□□ -0.21
NDE1-206ENST00000572967 GNEQ9Y223 722 aaKnown RBP13.71□□□□□ -0.21
NDE1-206ENST00000572967 MROH7Q68CQ1 1323 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 GBF1Q92538 1859 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 DCDC2CA8MYV0 355 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 ZBTB43O43298 467 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 GNAQP50148 359 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 EVCP57679 992 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 RPS6P62753 249 aaKnown RBP13.7□□□□□ -0.22
NDE1-206ENST00000572967 FAAP100Q0VG06 881 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 SHHQ15465 462 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 FSCN1Q16658 493 aaKnown RBP13.7□□□□□ -0.22
NDE1-206ENST00000572967 ASPRV1Q53RT3 343 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 ZNF654Q8IZM8 581 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 ZNF274Q96GC6 653 aaPredicted RBP13.7□□□□□ -0.22
NDE1-206ENST00000572967 TCEANC2Q96MN5 208 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 MAP3K14Q99558 947 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 LRRC2Q9BYS8 371 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 TSHZ2Q9NRE2 1034 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 RBM28Q9NW13 759 aaKnown RBP13.7□□□□□ -0.22
NDE1-206ENST00000572967 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
NDE1-206ENST00000572967 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
NDE1-206ENST00000572967 K7ELQ4 463 aaPredicted RBP13.69□□□□□ -0.22
NDE1-206ENST00000572967 CPLX1O14810 134 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 KIAA0355O15063 1070 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 CDKL5O76039 1030 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 PARP1P09874 1014 aaKnown RBP13.69□□□□□ -0.22
NDE1-206ENST00000572967 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
NDE1-206ENST00000572967 TOB2Q14106 344 aaPredicted RBP13.69□□□□□ -0.22
NDE1-206ENST00000572967 TAPT1Q6NXT6 567 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 APOA5Q6Q788 366 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 CXCL17Q6UXB2 119 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 ANKRD33Q7Z3H0 272 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 ADGRF4Q8IZF3 695 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 MORC4Q8TE76 937 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 FAM161BQ96MY7 647 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 PPP1R12CQ9BZL4 782 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 SLKQ9H2G2 1235 aaPredicted RBP13.69□□□□□ -0.22
NDE1-206ENST00000572967 SZT2Q5T011 3432 aa13.69□□□□□ -0.22
NDE1-206ENST00000572967 ELP1O95163 1332 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 GOLGA8AA7E2F4 631 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
NDE1-206ENST00000572967 HSP90AA1P07900 732 aaKnown RBP13.68□□□□□ -0.22
NDE1-206ENST00000572967 EPHB4P54760 987 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 FPGSQ05932 587 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 PDE4DQ08499 809 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 APOBRQ0VD83 1088 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 QRICH1Q2TAL8 776 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 GPR153Q6NV75 609 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 MICU3Q86XE3 530 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 FAM126BQ8IXS8 530 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 RNPC3Q96LT9 517 aaKnown RBP13.68□□□□□ -0.22
NDE1-206ENST00000572967 LZTS2Q9BRK4 669 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 PNMA2Q9UL42 364 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 LAMA3Q16787 3333 aa13.68□□□□□ -0.22
NDE1-206ENST00000572967 ABCB11O95342 1321 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 SCN10AQ9Y5Y9 1956 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 ARVCFO00192 962 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 PSMC6P62333 389 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 RTN1Q16799 776 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 OR6J1Q8NGC5 347 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 NID2Q14112 1375 aa13.67□□□□□ -0.22
NDE1-206ENST00000572967 SCN5AQ14524 2016 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 TLR3O15455 904 aaKnown RBP13.66□□□□□ -0.22
NDE1-206ENST00000572967 ZEB2O60315 1214 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 PFKFB2O60825 505 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 NKX3-2P78367 333 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 ZNF697Q5TEC3 545 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
NDE1-206ENST00000572967 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 SENP2Q9HC62 589 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
NDE1-206ENST00000572967 RBM19Q9Y4C8 960 aaKnown RBP13.66□□□□□ -0.22
NDE1-206ENST00000572967 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
NDE1-206ENST00000572967 B4GALT4O60513 344 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 MYL3P08590 195 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 EDNRBP24530 442 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 PDIA3P30101 505 aaKnown RBP13.65□□□□□ -0.22
NDE1-206ENST00000572967 CDK7P50613 346 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 TROAPQ12815 778 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 ITGA7Q13683 1181 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 GRM4Q14833 912 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms