RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 ISM2Q6H9L7 571 aa19.58■□□□□ 0.73
RPAIN-208ENST00000571043 BTNL9Q6UXG8 535 aa19.58■□□□□ 0.73
RPAIN-208ENST00000571043 CCSER1Q9C0I3 900 aa19.58■□□□□ 0.73
RPAIN-208ENST00000571043 CREBZFQ9NS37 354 aa19.58■□□□□ 0.73
RPAIN-208ENST00000571043 WDR46O15213 610 aaKnown RBP19.57■□□□□ 0.72
RPAIN-208ENST00000571043 BMP6P22004 513 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 MYL5Q02045 173 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 SNAPC2Q13487 334 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 QRICH1Q2TAL8 776 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 GRAMD1CQ8IYS0 662 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 MS4A4AQ96JQ5 239 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 GSDMAQ96QA5 445 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 NUP88Q99567 741 aaPredicted RBP19.57■□□□□ 0.72
RPAIN-208ENST00000571043 TMEM260Q9NX78 707 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 TMOD4Q9NZQ9 345 aa19.57■□□□□ 0.72
RPAIN-208ENST00000571043 VCAM1P19320 739 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 DPYDQ12882 1025 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 CDC37Q16543 378 aaPredicted RBP19.56■□□□□ 0.72
RPAIN-208ENST00000571043 PDXDC2PQ6P474 469 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 RASAL3Q86YV0 1011 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 SPC24Q8NBT2 197 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 PROCA1Q8NCQ7 364 aaPredicted RBP19.56■□□□□ 0.72
RPAIN-208ENST00000571043 CCDC102AQ96A19 550 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 PSTPIP2Q9H939 334 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 PLA2G6O60733 806 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 GTF2A2P52657 109 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 MOGSQ13724 837 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 FAM83BQ5T0W9 1011 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 SYDE2Q5VT97 1194 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 MCTP2Q6DN12 878 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 FASTKD5Q7L8L6 764 aaKnown RBP19.56■□□□□ 0.72
RPAIN-208ENST00000571043 DRC7Q8IY82 874 aa19.56■□□□□ 0.72
RPAIN-208ENST00000571043 NAP1L4Q99733 375 aaKnown RBP19.56■□□□□ 0.72
RPAIN-208ENST00000571043 LOC285556D6RIA3 1793 aa19.55■□□□□ 0.72
RPAIN-208ENST00000571043 FAM155AB1AL88 458 aaPredicted RBP19.55■□□□□ 0.72
RPAIN-208ENST00000571043 TMEM232C9JQI7 657 aa19.55■□□□□ 0.72
RPAIN-208ENST00000571043 GTPBP6O43824 516 aaPredicted RBP19.55■□□□□ 0.72
RPAIN-208ENST00000571043 SLC10A3P09131 477 aa19.55■□□□□ 0.72
RPAIN-208ENST00000571043 UBA7P41226 1012 aa19.55■□□□□ 0.72
RPAIN-208ENST00000571043 AFMP43652 599 aa19.55■□□□□ 0.72
RPAIN-208ENST00000571043 PPP4R3AQ6IN85 833 aa19.55■□□□□ 0.72
RPAIN-208ENST00000571043 DISC1Q9NRI5 854 aa19.55■□□□□ 0.72
RPAIN-208ENST00000571043 PCDHA1Q9Y5I3 950 aa19.55■□□□□ 0.72
RPAIN-208ENST00000571043 RASSF10A6NK89 507 aa19.54■□□□□ 0.72
RPAIN-208ENST00000571043 CETPP11597 493 aa19.54■□□□□ 0.72
RPAIN-208ENST00000571043 ERCC5P28715 1186 aaPredicted RBP19.54■□□□□ 0.72
RPAIN-208ENST00000571043 TEX2Q8IWB9 1127 aa19.54■□□□□ 0.72
RPAIN-208ENST00000571043 ENOX1Q8TC92 643 aaKnown RBP19.54■□□□□ 0.72
RPAIN-208ENST00000571043 CHURC1Q8WUH1 139 aa19.54■□□□□ 0.72
RPAIN-208ENST00000571043 MTMR9Q96QG7 549 aa19.54■□□□□ 0.72
RPAIN-208ENST00000571043 AMNQ9BXJ7 453 aa19.54■□□□□ 0.72
RPAIN-208ENST00000571043 CUEDC2Q9H467 287 aa19.54■□□□□ 0.72
RPAIN-208ENST00000571043 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
RPAIN-208ENST00000571043 FEM1BQ9UK73 627 aa19.54■□□□□ 0.72
RPAIN-208ENST00000571043 PARP14Q460N5 1801 aa19.53■□□□□ 0.72
RPAIN-208ENST00000571043 RLFQ13129 1914 aa19.53■□□□□ 0.72
RPAIN-208ENST00000571043 TESPA1A2RU30 521 aaPredicted RBP19.53■□□□□ 0.72
RPAIN-208ENST00000571043 GCFC2P16383 781 aaKnown RBP19.53■□□□□ 0.72
RPAIN-208ENST00000571043 HOXA7P31268 230 aaPredicted RBP19.53■□□□□ 0.72
RPAIN-208ENST00000571043 STAT6P42226 847 aa19.53■□□□□ 0.72
RPAIN-208ENST00000571043 MKRN3Q13064 507 aaKnown RBP19.53■□□□□ 0.72
RPAIN-208ENST00000571043 DEFB115Q30KQ5 88 aa19.53■□□□□ 0.72
RPAIN-208ENST00000571043 RRAGBQ5VZM2 374 aa19.53■□□□□ 0.72
RPAIN-208ENST00000571043 GADL1Q6ZQY3 521 aa19.53■□□□□ 0.72
RPAIN-208ENST00000571043 CATSPERGQ6ZRH7 1159 aa19.53■□□□□ 0.72
RPAIN-208ENST00000571043 TTC12Q9H892 705 aaPredicted RBP19.53■□□□□ 0.72
RPAIN-208ENST00000571043 MAGEF1Q9HAY2 307 aa19.53■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L15C9J2P7 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L13C9JLJ4 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L11C9JVI0 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L18D6R9N7 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L22D6RA61 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L17D6RBQ6 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L19D6RCP7 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L20D6RJB6 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 EDIL3O43854 480 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 MYL1P05976 194 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 STAT2P52630 851 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 USP17L24Q0WX57 530 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 TRAF1Q13077 416 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 UBE2SQ16763 222 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 TREML2Q5T2D2 321 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 FAM160B2Q86V87 743 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 HSD3B7Q9H2F3 369 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 AGTPBP1Q9UPW5 1226 aa19.52■□□□□ 0.72
RPAIN-208ENST00000571043 FXR2P51116 673 aaKnown RBP eCLIP19.51■□□□□ 0.71
RPAIN-208ENST00000571043 AP3B2Q13367 1082 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 KARSQ15046 597 aaKnown RBP19.51■□□□□ 0.71
RPAIN-208ENST00000571043 CALCRLQ16602 461 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 GPAT2Q6NUI2 795 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 CCDC186Q7Z3E2 898 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 IGSF22Q8N9C0 903 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 PRPF38AQ8NAV1 312 aaKnown RBP19.51■□□□□ 0.71
RPAIN-208ENST00000571043 BRI3BPQ8WY22 251 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 ZNF830Q96NB3 372 aaPredicted RBP19.51■□□□□ 0.71
RPAIN-208ENST00000571043 TANGO6Q9C0B7 1094 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 RMND1Q9NWS8 449 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 CCL15-CCL14A0A0B4J2E2 113 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms