RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CAMKK2Q96RR4 588 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 DBNDD2Q9BQY9 259 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 ZBED2Q9BTP6 218 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 SARGQ9BW04 601 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 TEX13AQ9BXU3 409 aaPredicted RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 ASPSCR1Q9BZE9 553 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CCDC113Q9H0I3 377 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 RBSNQ9H1K0 784 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CAAP1Q9H8G2 361 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CNNM2Q9H8M5 875 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CYP4F11Q9HBI6 524 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 KIAA1586Q9HCI6 787 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 COPRSQ9NQ92 184 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 SRP68Q9UHB9 627 aaKnown RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 GGT7Q9UJ14 662 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 DBNLQ9UJU6 430 aaKnown RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 GTF3C4Q9UKN8 822 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 MAGED1Q9Y5V3 778 aaPredicted RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 SCN9AQ15858 1988 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 LTBP1Q14766 1721 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 ABCC12Q96J65 1359 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 AOX1Q06278 1338 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 ITIH6Q6UXX5 1313 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 USP42Q9H9J4 1324 aaKnown RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 KLHL33A6NCF5 533 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 J3KRW8 73 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 CCP110O43303 1012 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 COBLO75128 1261 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 SKAP2O75563 359 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 FAM13AO94988 1023 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 CNOT4O95628 575 aaKnown RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 AGR2O95994 175 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 PCCAP05165 728 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 CCDC172P0C7W6 258 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 GLULP15104 373 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 XBP1P17861 261 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 HOXD10P28358 340 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 ADORA1P30542 326 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 PRPHP41219 470 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 FOXK1P85037 733 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 APBA1Q02410 837 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 CTDSPL2Q05D32 466 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 NCOA4Q13772 614 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 SLC9A5Q14940 896 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 ELF2Q15723 593 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 FXNQ16595 210 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 MUM1Q2TAK8 710 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 PKDCCQ504Y2 493 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 C2orf27AQ580R0 203 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 TNNI3KQ59H18 835 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 CDCA2Q69YH5 1023 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 ALG1LQ6GMV1 187 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 CCBE1Q6UXH8 406 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 BICDL1Q6ZP65 573 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 EEPD1Q7L9B9 569 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 RASGRP2Q7LDG7 609 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 MTERF4Q7Z6M4 381 aaKnown RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 THNSL2Q86YJ6 484 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 CCDC144CPQ8IYA2 1237 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 ZNF34Q8IZ26 560 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 NAXEQ8NCW5 288 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 GABPB2Q8TAK5 448 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 GJA10Q969M2 543 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 PRIMPOLQ96LW4 560 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 ZNF396Q96N95 335 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 LZTS2Q9BRK4 669 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 ESYT1Q9BSJ8 1104 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 USP26Q9BXU7 913 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 OSBPL5Q9H0X9 879 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 VPS33BQ9H267 617 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 BOLA2Q9H3K6 86 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 RPAP3Q9H6T3 665 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 GREM2Q9H772 168 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 UPF2Q9HAU5 1272 aaKnown RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 BCL2L12Q9HB09 334 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 SMYD2Q9NRG4 433 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 OBP2AQ9NY56 170 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 C6orf203Q9P0P8 240 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 ZFATQ9P243 1243 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 STIM2Q9P246 746 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 ARHGAP28Q9P2N2 729 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 SEPT3Q9UH03 358 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 GTF2IRD1Q9UHL9 959 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 TRPC5Q9UL62 973 aaPredicted RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 PALD1Q9ULE6 856 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 STRIP2Q9ULQ0 834 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 FPGT-TNNI3KV9GXZ4 949 aa4.02□□□□□ -1.77
SMG6-208ENST00000570874 BRCA1P38398 1863 aaKnown RBP4.02□□□□□ -1.77
SMG6-208ENST00000570874 MYH4Q9Y623 1939 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 CDHR2Q9BYE9 1310 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 A0A0D9SFI3 127 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 ERVV-1B6SEH8 477 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 SNAP23O00161 211 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 EYA2O00167 538 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 IRS4O14654 1257 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 ERC2O15083 957 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 E2F6O75461 281 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 RFPL1O75677 317 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 NTSR2O95665 410 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms