RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 RCCD1A6NED2 376 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 SMCO2A6NFE2 343 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 SPDYE3A6NKU9 549 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 FAM155AB1AL88 458 aaPredicted RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 PPP1R11O60927 126 aaPredicted RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 SLC25A27O95847 323 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 ZSCAN22P10073 491 aaPredicted RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 STAT3P40763 770 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 MRPL12P52815 198 aaKnown RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 KIF23Q02241 960 aaPredicted RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 MOGSQ13724 837 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 SLC35G1Q2M3R5 365 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 FOXD4L5Q5VV16 416 aaPredicted RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 MCTP2Q6DN12 878 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 LBX2Q6XYB7 198 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 BRAPQ7Z569 592 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 FERMT3Q86UX7 667 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 NCAPG2Q86XI2 1143 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 BLIDQ8IZY5 108 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 RGS22Q8NE09 1264 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 AGBL1Q96MI9 1066 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 P2RX7Q99572 595 aaKnown RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 PHF20Q9BVI0 1012 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 SPATC1LQ9H0A9 340 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 ACAD9Q9H845 621 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 PSTPIP2Q9H939 334 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 ZFYVE28Q9HCC9 887 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 NOL7Q9UMY1 257 aaKnown RBP7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 PCDHA4Q9UN74 947 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 KCNJ14Q9UNX9 436 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 IVNS1ABPQ9Y6Y0 642 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 PHIPQ8WWQ0 1821 aa7.54□□□□□ -1.2
CTDNEP1-204ENST00000570484 PFASO15067 1338 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 GCOM1H8Y6P7 765 aaPredicted RBP7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 ATP2A1O14983 1001 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 AOC2O75106 756 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 BRD1O95696 1058 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 F13A1P00488 732 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 CFBP00751 764 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 POLR2MP0CAP2 368 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 HSPA6P17066 643 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 NCLP19338 710 aaKnown RBP7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 CLCN1P35523 988 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 ERVK-9P63128 1117 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 ERVK-24P63145 666 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 AP3B2Q13367 1082 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 TMEM132BQ14DG7 1078 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 FAM110CQ1W6H9 321 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 NSMFQ6X4W1 530 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 KRT25Q7Z3Z0 450 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 RIOX2Q8IUF8 465 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 NOSTRINQ8IVI9 506 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 TEX2Q8IWB9 1127 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 ANKRD13CQ8N6S4 541 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 DAGLBQ8NCG7 672 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 CHST13Q8NET6 341 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 GPRC5AQ8NFJ5 357 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 TRERF1Q96PN7 1200 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 BEGAINQ9BUH8 593 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 ZMYND12Q9H0C1 365 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 FOXP1Q9H334 677 aaPredicted RBP7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 KDM4CQ9H3R0 1056 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 ZSCAN16Q9H4T2 348 aaPredicted RBP7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 TMEM134Q9H6X4 195 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 RIC8AQ9NPQ8 531 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 ZNF214Q9UL59 606 aaPredicted RBP7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 MTMR6Q9Y217 621 aa7.53□□□□□ -1.2
CTDNEP1-204ENST00000570484 ZNF536O15090 1300 aa7.52□□□□□ -1.2
CTDNEP1-204ENST00000570484 A0A0G2JMZ2 1700 aa7.52□□□□□ -1.2
CTDNEP1-204ENST00000570484 TAL1P17542 331 aaPredicted RBP7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 DNAJB2P25686 324 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 MAP2K2P36507 400 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 VEGFBP49765 207 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 C1QTNF8P60827 252 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 KCTD2Q14681 263 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 NONOQ15233 471 aaKnown RBP eCLIP7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 UBE2SQ16763 222 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 RNF207Q6ZRF8 634 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 PIK3AP1Q6ZUJ8 805 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 SPNS2Q8IVW8 549 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 ANKRD35Q8N283 1001 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 SHCBP1Q8NEM2 672 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 REPS2Q8NFH8 660 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 ZNF396Q96N95 335 aaPredicted RBP7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 GBP4Q96PP9 640 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 MPHOSPH6Q99547 160 aaKnown RBP7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 PTPN18Q99952 460 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 MROH8Q9H579 483 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 GJB4Q9NTQ9 266 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 BTBD7Q9P203 1132 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 ADAMTS5Q9UNA0 930 aa7.52□□□□□ -1.21
CTDNEP1-204ENST00000570484 BTBD18B2RXH4 712 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 GOLGA6L22H0YM25 854 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 SMAPO00193 183 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 NFIBO00712 420 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 CA12O43570 354 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 TLR2O60603 784 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 FOSP01100 380 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms