RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 DSCC1Q9BVC3 393 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 NKX2-4Q9H2Z4 354 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 NSUN3Q9H649 340 aaKnown RBP5.08□□□□□ -1.6
UBR1-211ENST00000569971 CYP26B1Q9NR63 512 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 TYW1Q9NV66 732 aaKnown RBP5.08□□□□□ -1.6
UBR1-211ENST00000569971 INTS7Q9NVH2 962 aaKnown RBP5.08□□□□□ -1.6
UBR1-211ENST00000569971 TNPO3Q9Y5L0 923 aaKnown RBP5.08□□□□□ -1.6
UBR1-211ENST00000569971 PRR33A8MZF0 331 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 H0Y8X5 98 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 SIGLEC6O43699 453 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 PRAMEF1O95521 474 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 S100BP04271 92 aaPredicted RBP5.07□□□□□ -1.6
UBR1-211ENST00000569971 AMPD2Q01433 879 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 MAP4K2Q12851 820 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 GRB10Q13322 594 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 FAM50AQ14320 339 aaKnown RBP5.07□□□□□ -1.6
UBR1-211ENST00000569971 ZNF460Q14592 562 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 PCBP1Q15365 356 aaKnown RBP eCLIP5.07□□□□□ -1.6
UBR1-211ENST00000569971 KCNA10Q16322 511 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 SLC35F1Q5T1Q4 408 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 CIAPIN1Q6FI81 312 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 DDX46Q7L014 1031 aaKnown RBP5.07□□□□□ -1.6
UBR1-211ENST00000569971 DTWD2Q8NBA8 298 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 GSTCDQ8NEC7 633 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 ATL2Q8NHH9 583 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 PTPRN2Q92932 1015 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 UBE2FQ969M7 185 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 MAGEB10Q96LZ2 347 aaPredicted RBP5.07□□□□□ -1.6
UBR1-211ENST00000569971 MCMBPQ9BTE3 642 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 CHST7Q9NS84 486 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 PRR13Q9NZ81 148 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 ZSWIM5Q9P217 1185 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 SF3B6Q9Y3B4 125 aaKnown RBP5.07□□□□□ -1.6
UBR1-211ENST00000569971 TRAF6Q9Y4K3 522 aa5.07□□□□□ -1.6
UBR1-211ENST00000569971 ASXL2Q76L83 1435 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 TCAF2A6NFQ2 919 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 B8ZZF3 427 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 H3BS24 57 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 OPA1O60313 960 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 EFCAB14O75071 495 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 SCG5P05408 212 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 NEK4P51957 841 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 NMIQ13287 307 aaPredicted RBP5.06□□□□□ -1.6
UBR1-211ENST00000569971 CLEC16AQ2KHT3 1053 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 BRDTQ58F21 947 aaPredicted RBP5.06□□□□□ -1.6
UBR1-211ENST00000569971 USP53Q70EK8 1073 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 NOL8Q76FK4 1167 aaKnown RBP5.06□□□□□ -1.6
UBR1-211ENST00000569971 AFAP1L2Q8N4X5 818 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 KREMEN2Q8NCW0 462 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 ABHD4Q8TB40 342 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 C1orf159Q96HA4 380 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 PCGF6Q9BYE7 350 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 MTFR1LQ9H019 292 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 DCP1AQ9NPI6 582 aaPredicted RBP5.06□□□□□ -1.6
UBR1-211ENST00000569971 MCM8Q9UJA3 840 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 TMEM59LQ9UK28 342 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 PCDHA9Q9Y5H5 950 aa5.06□□□□□ -1.6
UBR1-211ENST00000569971 TCRBV16S1A1N1A0A5B0 115 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 SHISA3A0PJX4 238 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 RASGRP1O95267 797 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 CRTAMO95727 393 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 CPP00450 1065 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 HPXP02790 462 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 ASLP04424 464 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 CTSKP43235 329 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 POU4F1Q01851 419 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 SCRN1Q12765 414 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 STRN3Q13033 797 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 KCNT2Q6UVM3 1135 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 PPM1KQ8N3J5 372 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 GPRC5CQ9NQ84 441 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 CHPF2Q9P2E5 772 aa5.05□□□□□ -1.6
UBR1-211ENST00000569971 EIF4G1Q04637 1599 aaKnown RBP5.04□□□□□ -1.6
UBR1-211ENST00000569971 BICRAQ9NZM4 1560 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 C2orf71A6NGG8 1288 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 NPIPB6E9PJ23 425 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 STXBP3O00186 592 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 ARNTLO00327 626 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 KPNA6O60684 536 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 EYA4O95677 639 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 GSNP06396 782 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 THBDP07204 575 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 CD3EP07766 207 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 JMJD7P0C870 316 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 POU3F2P20265 443 aaPredicted RBP5.04□□□□□ -1.6
UBR1-211ENST00000569971 TNK2Q07912 1038 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 CFAP100Q494V2 611 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 CWF19L1Q69YN2 538 aaKnown RBP5.04□□□□□ -1.6
UBR1-211ENST00000569971 PKN3Q6P5Z2 889 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 CRTC3Q6UUV7 619 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 MAMDC2Q7Z304 686 aaPredicted RBP5.04□□□□□ -1.6
UBR1-211ENST00000569971 IRF2BP1Q8IU81 584 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 LILRA2Q8N149 483 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 AHI1Q8N157 1196 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 FRS2Q8WU20 508 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 DCAF4Q8WV16 495 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 JDP2Q8WYK2 163 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 DIRC2Q96SL1 478 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 CEP89Q96ST8 783 aa5.04□□□□□ -1.6
UBR1-211ENST00000569971 SMARCA2P51531 1590 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms