RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 SHANK3Q9BYB0 1731 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 TNKSO95271 1327 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 H3BRJ5 948 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 RGS13O14921 159 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 PRPF3O43395 683 aaKnown RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF862O60290 1169 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 OPA1O60313 960 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 SIN3BO75182 1162 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 FBXO21O94952 628 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 TP53P04637 393 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 U2AF1L5P0DN76 240 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 BPIP17213 487 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 EPHA1P21709 976 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 FGFR3P22607 806 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 HOXC9P31274 260 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 FLT3P36888 993 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 GRIA2P42262 883 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 ARL4DP49703 201 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 YARSP54577 528 aaKnown RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 PURAQ00577 322 aaKnown RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 U2AF1Q01081 240 aaKnown RBP eCLIP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 TBC1D8BQ0IIM8 1120 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 MORC3Q14149 939 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 SEPT7Q16181 437 aaKnown RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 CFAP100Q494V2 611 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 ZFYVE27Q5T4F4 411 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 SPTY2D1Q68D10 685 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 CXorf57Q6NSI4 855 aaKnown RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 ELMSAN1Q6PJG2 1045 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 TRIM67Q6ZTA4 783 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 TRIM46Q7Z4K8 759 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 BRAPQ7Z569 592 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 FGD2Q7Z6J4 655 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 SYT9Q86SS6 491 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF227Q86WZ6 799 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 MCATQ8IVS2 390 aaKnown RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 TMEM192Q8IY95 271 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF513Q8N8E2 541 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 FLAD1Q8NFF5 587 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 PI4K2BQ8TCG2 481 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 JPH3Q8WXH2 748 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 TTC9Q92623 222 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 USP7Q93009 1102 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 PPP1R14AQ96A00 147 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 COG3Q96JB2 828 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 SCYL1Q96KG9 808 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 ZFP42Q96MM3 310 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 SLC6A18Q96N87 628 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 HAUS7Q99871 368 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 RHOBTB2Q9BYZ6 727 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 NRSN2Q9GZP1 204 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 WNT10AQ9GZT5 417 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 IFT22Q9H7X7 185 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 OSGEPQ9NPF4 335 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 OBP2AQ9NY56 170 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 FRRS1LQ9P0K9 344 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 BCCIPQ9P287 314 aaKnown RBP eCLIP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 APEX2Q9UBZ4 518 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 NDOR1Q9UHB4 597 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 CCNL1Q9UK58 526 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-221ENST00000569924 PHF24Q9UPV7 400 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 USP47Q96K76 1375 aa4.02□□□□□ -1.77
CNOT1-221ENST00000569924 MEGF6O75095 1541 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 SLC35F4A4IF30 521 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 DCDC2CA8MYV0 355 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 NEMP1O14524 444 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 KPNA6O60684 536 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 WDHD1O75717 1129 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 ECEL1O95672 775 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 FOSP01100 380 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 CENPBP07199 599 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 JMJD7P0C870 316 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 PYGMP11217 842 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 BMP1P13497 986 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 YBX3P16989 372 aaKnown RBP eCLIP4.01□□□□□ -1.771e-19■□□□□ 10.1
CNOT1-221ENST00000569924 IGFALSP35858 605 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 AMPHP49418 695 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 SCNN1BP51168 640 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 ETF1P62495 437 aaKnown RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 TMPRSS15P98073 1019 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 RING1Q06587 406 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 C19orf57Q0VDD7 668 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF460Q14592 562 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 KIF4BQ2VIQ3 1234 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 ZC3H12AQ5D1E8 599 aaKnown RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF468Q5VIY5 522 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 UBE2R2Q712K3 238 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 C12orf40Q86WS4 652 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 COL23A1Q86Y22 540 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 KIF18BQ86Y91 864 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 FAM13CQ8NE31 585 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 NLGN2Q8NFZ4 835 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 PTPRN2Q92932 1015 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 TNFRSF25Q93038 417 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 WNT8BQ93098 351 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 SYTL4Q96C24 671 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 LTV1Q96GA3 475 aaPredicted RBP4.01□□□□□ -1.77
CNOT1-221ENST00000569924 SCLYQ96I15 445 aa4.01□□□□□ -1.77
CNOT1-221ENST00000569924 MAGEB10Q96LZ2 347 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms