RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ARHGEF16Q5VV41 709 aa26.22■■□□□ 1.79
RBFOX1-219ENST00000569895 PSRC1Q6PGN9 363 aaPredicted RBP26.22■■□□□ 1.79
RBFOX1-219ENST00000569895 GUCD1Q96NT3 240 aa26.22■■□□□ 1.79
RBFOX1-219ENST00000569895 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.22■■□□□ 1.79
RBFOX1-219ENST00000569895 MAP3K20Q9NYL2 800 aaKnown RBP26.22■■□□□ 1.79
RBFOX1-219ENST00000569895 MAD2L2Q9UI95 211 aa26.22■■□□□ 1.79
RBFOX1-219ENST00000569895 TMEM265A0A087WTH1 108 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 PALM3A6NDB9 673 aaPredicted RBP26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 E7EWF7 191 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 ZBTB5O15062 677 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 B4GALT4O60513 344 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 CYP2C18P33260 490 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 WTAPQ15007 396 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 TMEM240Q5SV17 173 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 SAMD3Q8N6K7 520 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 MAP4K1Q92918 833 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 TRPV6Q9H1D0 765 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 ALDH8A1Q9H2A2 487 aaPredicted RBP26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 LCTP09848 1927 aa26.21■■□□□ 1.79
RBFOX1-219ENST00000569895 A6NJR5 290 aa26.2■■□□□ 1.78
RBFOX1-219ENST00000569895 CFBP00751 764 aa26.2■■□□□ 1.78
RBFOX1-219ENST00000569895 MTIF3Q9H2K0 278 aaKnown RBP26.2■■□□□ 1.78
RBFOX1-219ENST00000569895 IL23AQ9NPF7 189 aa26.2■■□□□ 1.78
RBFOX1-219ENST00000569895 PCDHA1Q9Y5I3 950 aa26.2■■□□□ 1.78
RBFOX1-219ENST00000569895 SEPT14Q6ZU15 432 aa26.19■■□□□ 1.78
RBFOX1-219ENST00000569895 C16orf59Q7L2K0 433 aa26.19■■□□□ 1.78
RBFOX1-219ENST00000569895 MTMR8Q96EF0 704 aa26.19■■□□□ 1.78
RBFOX1-219ENST00000569895 ACRP10323 421 aa26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 GRM4Q14833 912 aa26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 ZNF365Q70YC5 407 aa26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 CATIPQ7Z7H3 387 aa26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 RPUSD2Q8IZ73 545 aaKnown RBP26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 COPS5Q92905 334 aa26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 CDX2Q99626 313 aaPredicted RBP26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 NOC4LQ9BVI4 516 aaKnown RBP26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 COL20A1Q9P218 1284 aa26.18■■□□□ 1.78
RBFOX1-219ENST00000569895 EIF3JO75822 258 aaKnown RBP26.17■■□□□ 1.78
RBFOX1-219ENST00000569895 GH1P01241 217 aa26.17■■□□□ 1.78
RBFOX1-219ENST00000569895 FGBP02675 491 aa26.17■■□□□ 1.78
RBFOX1-219ENST00000569895 TMEM67Q5HYA8 995 aa26.17■■□□□ 1.78
RBFOX1-219ENST00000569895 CCDC62Q6P9F0 684 aa26.17■■□□□ 1.78
RBFOX1-219ENST00000569895 NR3C2P08235 984 aa26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 EIF2AK2P19525 551 aaKnown RBP26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 HSD17B4P51659 736 aa26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 PTPN11Q06124 597 aaPredicted RBP26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 NBPF20Q3BBV1 942 aa26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 FAM47CQ5HY64 1035 aa26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 NFRKBQ6P4R8 1299 aa26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 RIOX1Q9H6W3 641 aa26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 PXMP2Q9NR77 195 aa26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 RBM8AQ9Y5S9 174 aaKnown RBP26.16■■□□□ 1.78
RBFOX1-219ENST00000569895 ARIH2O95376 493 aa26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 CCL23P55773 120 aa26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 GHRHRQ02643 423 aa26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 TROAPQ12815 778 aa26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 RASIP1Q5U651 963 aa26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 HOMER1Q86YM7 354 aa26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 HERVK_113Q902F9 699 aa26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 TTYH1Q9H313 450 aaPredicted RBP26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 TRMT13Q9NUP7 481 aaKnown RBP26.15■■□□□ 1.78
RBFOX1-219ENST00000569895 DNAJB2P25686 324 aa26.14■■□□□ 1.78
RBFOX1-219ENST00000569895 LY6KQ17RY6 165 aa26.14■■□□□ 1.78
RBFOX1-219ENST00000569895 CASC1Q6TDU7 716 aa26.14■■□□□ 1.78
RBFOX1-219ENST00000569895 CHST3Q7LGC8 479 aa26.14■■□□□ 1.78
RBFOX1-219ENST00000569895 MTA3Q9BTC8 594 aa26.14■■□□□ 1.78
RBFOX1-219ENST00000569895 PNMA6FA0A0J9YX94 578 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 GCOM1H8Y6P7 765 aaPredicted RBP26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 POLR2MP0CAP2 368 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 CASTP20810 708 aaKnown RBP26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 KCNV1Q6PIU1 500 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 STOX1Q6ZVD7 989 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 TMTC2Q8N394 836 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 IGDCC4Q8TDY8 1250 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 AFG1LQ8WV93 481 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 TIFAQ96CG3 184 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 PIGSQ96S52 555 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 MRVI1Q9Y6F6 885 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 TAF6LQ9Y6J9 622 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 UMODL1Q5DID0 1318 aa26.13■■□□□ 1.77
RBFOX1-219ENST00000569895 PPP1R11O60927 126 aaPredicted RBP26.12■■□□□ 1.77
RBFOX1-219ENST00000569895 MB21D2Q8IYB1 491 aaPredicted RBP26.12■■□□□ 1.77
RBFOX1-219ENST00000569895 MAP3K14Q99558 947 aa26.12■■□□□ 1.77
RBFOX1-219ENST00000569895 SENP2Q9HC62 589 aa26.12■■□□□ 1.77
RBFOX1-219ENST00000569895 DDX41Q9UJV9 622 aaKnown RBP26.12■■□□□ 1.77
RBFOX1-219ENST00000569895 LAMA2P24043 3122 aaKnown RBP26.12■■□□□ 1.77
RBFOX1-219ENST00000569895 COL6A3P12111 3177 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 OPLAHO14841 1288 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 PFKMP08237 780 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 CYP2C9P11712 490 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 KIF5BP33176 963 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 LAMC2Q13753 1193 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 DGKDQ16760 1214 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 RETREG2Q8NC44 543 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 CTCFLQ8NI51 663 aaPredicted RBP26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 WNT8AQ9H1J5 351 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 NOD1Q9Y239 953 aa26.11■■□□□ 1.77
RBFOX1-219ENST00000569895 MMP3P08254 477 aa26.1■■□□□ 1.77
RBFOX1-219ENST00000569895 MYCLP12524 364 aaPredicted RBP26.1■■□□□ 1.77
RBFOX1-219ENST00000569895 HOXA13P31271 388 aaPredicted RBP26.1■■□□□ 1.77
RBFOX1-219ENST00000569895 ANTXR2P58335 489 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms