RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PROS1P07225 676 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 TTC6Q86TZ1 520 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 MYOCDQ8IZQ8 938 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 SPICE1Q8N0Z3 855 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 SPATA5Q8NB90 893 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 SUMF1Q8NBK3 374 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 RTP3Q9BQQ7 232 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 FBXO28Q9NVF7 368 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 ANGPTL2Q9UKU9 493 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 NOD1Q9Y239 953 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 SPTA1P02549 2419 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 ATP2A1O14983 1001 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 PI15O43692 258 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 GLP2RO95838 553 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 MMP1P03956 469 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 TIMM10P62072 90 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 SHC2P98077 582 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 LMNB2Q03252 620 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 CCDC27Q2M243 656 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 SNRNP48Q6IEG0 339 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 NAA16Q6N069 864 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 TAPT1Q6NXT6 567 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 SLC4A10Q6U841 1118 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 SIAH1Q8IUQ4 282 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 TOP1MTQ969P6 601 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 CTAGE1Q96RT6 745 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 YME1L1Q96TA2 773 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 GPHNQ9NQX3 736 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 LRP2BPQ9P2M1 347 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 DACH1Q9UI36 760 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 RWDD3Q9Y3V2 267 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 ZNF462Q96JM2 2506 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 LCTP09848 1927 aa8.09□□□□□ -1.11
HERPUD1-217ENST00000569429 KIAA1671Q9BY89 1806 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 ASB14A6NK59 587 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 APAF1O14727 1248 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 IGSF3O75054 1194 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 VAMP4O75379 141 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 LINC00271P0C7V0 271 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 NPR3P17342 541 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 CTNNB1P35222 781 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 BMPR1AP36894 532 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 IL15P40933 162 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 CPT1AP50416 773 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 CAMK1Q14012 370 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 MVPQ14764 893 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 WDR43Q15061 677 aaKnown RBP eCLIP8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 PTGISQ16647 500 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 PPM1JQ5JR12 505 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 LRSAM1Q6UWE0 723 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 PI16Q6UXB8 463 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 TMEM179Q6ZVK1 233 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 ADGRA1Q86SQ6 560 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 ANKRD35Q8N283 1001 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 FAM133AQ8N9E0 248 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 FLCNQ8NFG4 579 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 BORCS6Q96GS4 357 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 XAGE2Q96GT9 111 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 SH2D4AQ9H788 454 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 ARHGEF10LQ9HCE6 1279 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 PDGFCQ9NRA1 345 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 FBXO40Q9UH90 709 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 BARX2Q9UMQ3 279 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
HERPUD1-217ENST00000569429 PLXNA4Q9HCM2 1894 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 KPNA6O60684 536 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 LGR5O75473 907 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 ZIC2O95409 532 aaPredicted RBP8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 MYL3P08590 195 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 ARP10275 920 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 CKBP12277 381 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 PMLP29590 882 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 GABPAQ06546 454 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 DUSP28Q4G0W2 176 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 VARS2Q5ST30 1063 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 TMEM63BQ5T3F8 832 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 ADGRD2Q7Z7M1 963 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 SESTD1Q86VW0 696 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 CHST13Q8NET6 341 aa8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 DHX38Q92620 1227 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 CLP1Q92989 425 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-217ENST00000569429 MIA3Q5JRA6 1907 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 USP17L12C9JPN9 530 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 USP17L21D6R901 530 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 MPHOSPH10O00566 681 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 ARID4AP29374 1257 aaPredicted RBP8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 PLCD1P51178 756 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 ZNF200P98182 395 aaPredicted RBP8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 CNTN2Q02246 1040 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 MBTPS1Q14703 1052 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 TRAF7Q6Q0C0 670 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 FIBCD1Q8N539 461 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 PPP1R13LQ8WUF5 828 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 PLVAPQ9BX97 442 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 SMOC2Q9H3U7 446 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 ZMIZ1Q9ULJ6 1067 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 NR2E1Q9Y466 385 aa8.06□□□□□ -1.12
HERPUD1-217ENST00000569429 EMSYQ7Z589 1322 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 KAT6AQ92794 2004 aa8.05□□□□□ -1.12
HERPUD1-217ENST00000569429 SP9P0CG40 484 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms