RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 RRP36Q96EU6 259 aaKnown RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 LZTS2Q9BRK4 669 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 PCDH10Q9P2E7 1040 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 GNEQ9Y223 722 aaKnown RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 FRMPD3Q5JV73 1810 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 PTGS1P23219 599 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 ANP32AP39687 249 aaKnown RBP16.73■□□□□ 0.27
COMMD4-225ENST00000569245 TLE2Q04725 743 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 SNX17Q15036 470 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 ADCK5Q3MIX3 580 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 DUSP28Q4G0W2 176 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 TMEM63BQ5T3F8 832 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 C1orf53Q5VUE5 145 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 TCEANC2Q96MN5 208 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 JAKMIP1Q96N16 626 aaKnown RBP16.73■□□□□ 0.27
COMMD4-225ENST00000569245 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 COL20A1Q9P218 1284 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 Q9Y3F1 56 aa16.73■□□□□ 0.27
COMMD4-225ENST00000569245 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
COMMD4-225ENST00000569245 EIF2AK2P19525 551 aaKnown RBP16.72■□□□□ 0.27
COMMD4-225ENST00000569245 EDNRBP24530 442 aa16.72■□□□□ 0.27
COMMD4-225ENST00000569245 HOXA13P31271 388 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-225ENST00000569245 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
COMMD4-225ENST00000569245 MICU3Q86XE3 530 aa16.72■□□□□ 0.27
COMMD4-225ENST00000569245 FANCBQ8NB91 859 aa16.72■□□□□ 0.27
COMMD4-225ENST00000569245 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
COMMD4-225ENST00000569245 IWS1Q96ST2 819 aa16.72■□□□□ 0.27
COMMD4-225ENST00000569245 GDF15Q99988 308 aa16.72■□□□□ 0.27
COMMD4-225ENST00000569245 SPZ1Q9BXG8 430 aa16.72■□□□□ 0.27
COMMD4-225ENST00000569245 UBE2OQ9C0C9 1292 aaKnown RBP16.72■□□□□ 0.27
COMMD4-225ENST00000569245 ELP1O95163 1332 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 DCDC2CA8MYV0 355 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 GCOM1H8Y6P7 765 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-225ENST00000569245 OPLAHO14841 1288 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 CTAGE5O15320 804 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 POLR2MP0CAP2 368 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 TXNP10599 105 aaKnown RBP16.71■□□□□ 0.27
COMMD4-225ENST00000569245 CASTP20810 708 aaKnown RBP16.71■□□□□ 0.27
COMMD4-225ENST00000569245 HSD17B4P51659 736 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 EXOSC10Q01780 885 aaKnown RBP16.71■□□□□ 0.27
COMMD4-225ENST00000569245 STXBP2Q15833 593 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 CXCL17Q6UXB2 119 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 SEPT14Q6ZU15 432 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 SGMS1Q86VZ5 419 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
COMMD4-225ENST00000569245 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 OR6J1Q8NGC5 347 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 PRO3102Q9H379 93 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 MAP3K20Q9NYL2 800 aaKnown RBP16.71■□□□□ 0.27
COMMD4-225ENST00000569245 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-225ENST00000569245 CYP46A1Q9Y6A2 500 aa16.71■□□□□ 0.27
COMMD4-225ENST00000569245 ALPK3Q96L96 1907 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 MCM3APO60318 1980 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 RBM47A0AV96 593 aaKnown RBP16.7■□□□□ 0.26
COMMD4-225ENST00000569245 CLTBP09497 229 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 BMP8BP34820 402 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 NKX3-2P78367 333 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 TTLL4Q14679 1199 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 BRDTQ58F21 947 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-225ENST00000569245 BLOC1S2Q6QNY1 142 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 RUFY3Q7L099 469 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 FCHSD1Q86WN1 690 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 SRBD1Q8N5C6 995 aaKnown RBP16.7■□□□□ 0.26
COMMD4-225ENST00000569245 SAMD3Q8N6K7 520 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 SNX21Q969T3 373 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 TMEM39AQ9NV64 488 aa16.7■□□□□ 0.26
COMMD4-225ENST00000569245 A0A0U1RQG5 324 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-225ENST00000569245 A0A1W2PPC1 479 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 NKRFO15226 690 aaKnown RBP eCLIP16.69■□□□□ 0.26
COMMD4-225ENST00000569245 ZBTB43O43298 467 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 ST18O60284 1047 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
COMMD4-225ENST00000569245 CABYRO75952 493 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 NR3C2P08235 984 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 MYCLP12524 364 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-225ENST00000569245 RPS6KB1P23443 525 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 CPT1AP50416 773 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 NEK4P51957 841 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 SH3RF1Q7Z6J0 888 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
COMMD4-225ENST00000569245 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-225ENST00000569245 PDLIM7Q9NR12 457 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 MROH7Q68CQ1 1323 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 TRIOBPQ9H2D6 2365 aa16.69■□□□□ 0.26
COMMD4-225ENST00000569245 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 TRIM43BA6NCK2 446 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 ARVCFO00192 962 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 MYL3P08590 195 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 CPA1P15085 419 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 FXR1P51114 621 aaKnown RBP eCLIP16.68■□□□□ 0.26
COMMD4-225ENST00000569245 GHRHRQ02643 423 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 APOA5Q6Q788 366 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 TMTC3Q6ZXV5 915 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 ANKRD33Q7Z3H0 272 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 COPS5Q92905 334 aa16.68■□□□□ 0.26
COMMD4-225ENST00000569245 CUL5Q93034 780 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms