RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 CCDC62Q6P9F0 684 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 NOL8Q76FK4 1167 aaKnown RBP9.1□□□□□ -0.95
CDH3-209ENST00000569080 ZNF654Q8IZM8 581 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 SCFD2Q8WU76 684 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 COPS5Q92905 334 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 PIGSQ96S52 555 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 MAP3K14Q99558 947 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 MYL10Q9BUA6 226 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 VAT1LQ9HCJ6 419 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 ANO2Q9NQ90 1003 aa9.1□□□□□ -0.95
CDH3-209ENST00000569080 MRPL11Q9Y3B7 192 aaKnown RBP9.1□□□□□ -0.95
CDH3-209ENST00000569080 ERICH2A1L162 156 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 A6NJR5 290 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 DCDC2CA8MYV0 355 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 NKRFO15226 690 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDH3-209ENST00000569080 CABYRO75952 493 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 RGS20O76081 388 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 RAG1P15918 1043 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 LIFRP42702 1097 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 PSMC6P62333 389 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 ITGA7Q13683 1181 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 HOMER1Q86YM7 354 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 MCF2L2Q86YR7 1114 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 IL31RAQ8NI17 732 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 NSUN6Q8TEA1 469 aaKnown RBP9.09□□□□□ -0.95
CDH3-209ENST00000569080 TMEM87BQ96K49 555 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 RMDN3Q96TC7 470 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 SPZ1Q9BXG8 430 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 AP5M1Q9H0R1 490 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 PXMP2Q9NR77 195 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 TMEM39AQ9NV64 488 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 PCDHA1Q9Y5I3 950 aa9.09□□□□□ -0.95
CDH3-209ENST00000569080 UMODL1Q5DID0 1318 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 PNMA6FA0A0J9YX94 578 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 B4GALT4O60513 344 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 CDC45O75419 566 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 PLEKHA8P1O95397 391 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 CFBP00751 764 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 TIMP1P01033 207 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 EIF2AK2P19525 551 aaKnown RBP9.08□□□□□ -0.96
CDH3-209ENST00000569080 MCM5P33992 734 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 CPT1AP50416 773 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 FPGSQ05932 587 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 ARHGAP1Q07960 439 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 Q7L0L9 218 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 CATIPQ7Z7H3 387 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 SGMS1Q86VZ5 419 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 RASEFQ8IZ41 740 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 OR6J1Q8NGC5 347 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 VWCEQ96DN2 955 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 IWS1Q96ST2 819 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 MPHOSPH6Q99547 160 aaKnown RBP9.08□□□□□ -0.96
CDH3-209ENST00000569080 PDCD2LQ9BRP1 358 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 LRRC2Q9BYS8 371 aa9.08□□□□□ -0.96
CDH3-209ENST00000569080 ZEB2O60315 1214 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 NR3C2P08235 984 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 TXNP10599 105 aaKnown RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 RXRAP19793 462 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 SMARCA1P28370 1054 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 HOXA13P31271 388 aaPredicted RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 EXOSC10Q01780 885 aaKnown RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 TTLL4Q14679 1199 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 PGM5Q15124 567 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 ADCK5Q3MIX3 580 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 TSGA10IPQ3SY00 556 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 RASIP1Q5U651 963 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 ARHGEF16Q5VV41 709 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 MFSD5Q6N075 450 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 CASC1Q6TDU7 716 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 C16orf59Q7L2K0 433 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 SRBD1Q8N5C6 995 aaKnown RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 SAMD3Q8N6K7 520 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 KCNB2Q92953 911 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 EMID1Q96A84 441 aaPredicted RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 NOC4LQ9BVI4 516 aaKnown RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 TRPV6Q9H1D0 765 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 WNT8AQ9H1J5 351 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 ALDH8A1Q9H2A2 487 aaPredicted RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 POLR3EQ9NVU0 708 aa9.07□□□□□ -0.96
CDH3-209ENST00000569080 MAP3K20Q9NYL2 800 aaKnown RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 DDX41Q9UJV9 622 aaKnown RBP9.07□□□□□ -0.96
CDH3-209ENST00000569080 CNTNAP5Q8WYK1 1306 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 REV3LO60673 3130 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 SCN5AQ14524 2016 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 B4DLN1 442 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 EIF3JO75822 258 aaKnown RBP9.06□□□□□ -0.96
CDH3-209ENST00000569080 MMP3P08254 477 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 HOXD8P13378 290 aaPredicted RBP9.06□□□□□ -0.96
CDH3-209ENST00000569080 CSF2RAP15509 400 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 KIF5BP33176 963 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 MRPL12P52815 198 aaKnown RBP9.06□□□□□ -0.96
CDH3-209ENST00000569080 FUT2Q10981 343 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 STXBP2Q15833 593 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 LY6KQ17RY6 165 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 FAM109BQ6ICB4 259 aaPredicted RBP9.06□□□□□ -0.96
CDH3-209ENST00000569080 APOA5Q6Q788 366 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 SEPT14Q6ZU15 432 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 TMTC3Q6ZXV5 915 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 VSIG10LQ86VR7 867 aa9.06□□□□□ -0.96
CDH3-209ENST00000569080 RAB11FIP4Q86YS3 637 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms