RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 RASEFQ8IZ41 740 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 TMTC2Q8N394 836 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 CTCFLQ8NI51 663 aaPredicted RBP23.37■■□□□ 1.33
ABCA3-206ENST00000569062 NSUN6Q8TEA1 469 aaKnown RBP23.37■■□□□ 1.33
ABCA3-206ENST00000569062 PIBF1Q8WXW3 757 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 TOX2Q96NM4 488 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 PNMA6FA0A0J9YX94 578 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 ARVCFO00192 962 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 LIFRP42702 1097 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 GHRHRQ02643 423 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 RAB11FIP4Q86YS3 637 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 SCFD2Q8WU76 684 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 COPS5Q92905 334 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 LRCH3Q96II8 777 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 NEK1Q96PY6 1258 aa23.36■■□□□ 1.33
ABCA3-206ENST00000569062 DCDC2CA8MYV0 355 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 ARIH2O95376 493 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 EIF2AK2P19525 551 aaKnown RBP23.35■■□□□ 1.33
ABCA3-206ENST00000569062 HOXA13P31271 388 aaPredicted RBP23.35■■□□□ 1.33
ABCA3-206ENST00000569062 PPP2R5BQ15173 497 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 ADCK5Q3MIX3 580 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 ARHGEF16Q5VV41 709 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 OR6J1Q8NGC5 347 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 IWS1Q96ST2 819 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 PXMP2Q9NR77 195 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 TMEM39AQ9NV64 488 aa23.35■■□□□ 1.33
ABCA3-206ENST00000569062 KIAA0355O15063 1070 aa23.34■■□□□ 1.33
ABCA3-206ENST00000569062 ZEB2O60315 1214 aa23.34■■□□□ 1.33
ABCA3-206ENST00000569062 PLEKHA8P1O95397 391 aa23.34■■□□□ 1.33
ABCA3-206ENST00000569062 TXNP10599 105 aaKnown RBP23.34■■□□□ 1.33
ABCA3-206ENST00000569062 KIF5BP33176 963 aa23.34■■□□□ 1.33
ABCA3-206ENST00000569062 STXBP2Q15833 593 aa23.34■■□□□ 1.33
ABCA3-206ENST00000569062 SEPT14Q6ZU15 432 aa23.34■■□□□ 1.33
ABCA3-206ENST00000569062 CMTR1Q8N1G2 835 aaKnown RBP23.34■■□□□ 1.33
ABCA3-206ENST00000569062 TCEANC2Q96MN5 208 aa23.34■■□□□ 1.33
ABCA3-206ENST00000569062 SPZ1Q9BXG8 430 aa23.34■■□□□ 1.33
ABCA3-206ENST00000569062 MAP3K20Q9NYL2 800 aaKnown RBP23.34■■□□□ 1.33
ABCA3-206ENST00000569062 GRIN2DO15399 1336 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 MROH7Q68CQ1 1323 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 CABYRO75952 493 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 RAG1P15918 1043 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 PSMC6P62333 389 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 TRAF1Q13077 416 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 TSGA10IPQ3SY00 556 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 FAM126BQ8IXS8 530 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 SRBD1Q8N5C6 995 aaKnown RBP23.33■■□□□ 1.33
ABCA3-206ENST00000569062 SLC12A7Q9Y666 1083 aa23.33■■□□□ 1.33
ABCA3-206ENST00000569062 NKRFO15226 690 aaKnown RBP eCLIP23.32■■□□□ 1.32
ABCA3-206ENST00000569062 NR3C2P08235 984 aa23.32■■□□□ 1.32
ABCA3-206ENST00000569062 EXOSC10Q01780 885 aaKnown RBP23.32■■□□□ 1.32
ABCA3-206ENST00000569062 ITGA7Q13683 1181 aa23.32■■□□□ 1.32
ABCA3-206ENST00000569062 TTLL4Q14679 1199 aa23.32■■□□□ 1.32
ABCA3-206ENST00000569062 LRIT3Q3SXY7 679 aa23.32■■□□□ 1.32
ABCA3-206ENST00000569062 CCDC62Q6P9F0 684 aa23.32■■□□□ 1.32
ABCA3-206ENST00000569062 SGMS1Q86VZ5 419 aa23.32■■□□□ 1.32
ABCA3-206ENST00000569062 SLC43A3Q8NBI5 491 aa23.32■■□□□ 1.32
ABCA3-206ENST00000569062 CALM1P0DP23 149 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 CALM2P0DP24 149 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 CALM3P0DP25 149 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 SMARCA1P28370 1054 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 CPT1AP50416 773 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 LY6KQ17RY6 165 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 DHX32Q7L7V1 743 aaKnown RBP23.31■■□□□ 1.32
ABCA3-206ENST00000569062 SAMD3Q8N6K7 520 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 RRP36Q96EU6 259 aaKnown RBP23.31■■□□□ 1.32
ABCA3-206ENST00000569062 LZTS2Q9BRK4 669 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 TBX21Q9UL17 535 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 MYH7BA7E2Y1 1941 aa23.31■■□□□ 1.32
ABCA3-206ENST00000569062 LAMA2P24043 3122 aaKnown RBP23.31■■□□□ 1.32
ABCA3-206ENST00000569062 GCOM1H8Y6P7 765 aaPredicted RBP23.3■■□□□ 1.32
ABCA3-206ENST00000569062 MYL3P08590 195 aa23.3■■□□□ 1.32
ABCA3-206ENST00000569062 POLR2MP0CAP2 368 aa23.3■■□□□ 1.32
ABCA3-206ENST00000569062 GNAQP50148 359 aa23.3■■□□□ 1.32
ABCA3-206ENST00000569062 PURAQ00577 322 aaKnown RBP23.3■■□□□ 1.32
ABCA3-206ENST00000569062 MICU3Q86XE3 530 aa23.3■■□□□ 1.32
ABCA3-206ENST00000569062 PDCD2LQ9BRP1 358 aa23.3■■□□□ 1.32
ABCA3-206ENST00000569062 POLR3EQ9NVU0 708 aa23.3■■□□□ 1.32
ABCA3-206ENST00000569062 EIF3JO75822 258 aaKnown RBP23.29■■□□□ 1.32
ABCA3-206ENST00000569062 CD4P01730 458 aa23.29■■□□□ 1.32
ABCA3-206ENST00000569062 MYCLP12524 364 aaPredicted RBP23.29■■□□□ 1.32
ABCA3-206ENST00000569062 PGM5Q15124 567 aa23.29■■□□□ 1.32
ABCA3-206ENST00000569062 SHHQ15465 462 aa23.29■■□□□ 1.32
ABCA3-206ENST00000569062 C9orf50Q5SZB4 431 aa23.29■■□□□ 1.32
ABCA3-206ENST00000569062 FCHSD1Q86WN1 690 aa23.29■■□□□ 1.32
ABCA3-206ENST00000569062 CCDC82Q8N4S0 544 aa23.29■■□□□ 1.32
ABCA3-206ENST00000569062 FANCBQ8NB91 859 aa23.29■■□□□ 1.32
ABCA3-206ENST00000569062 IL31RAQ8NI17 732 aa23.29■■□□□ 1.32
ABCA3-206ENST00000569062 SEC63Q9UGP8 760 aaKnown RBP23.29■■□□□ 1.32
ABCA3-206ENST00000569062 A6NJR5 290 aa23.28■■□□□ 1.32
ABCA3-206ENST00000569062 TLR3O15455 904 aaKnown RBP23.28■■□□□ 1.32
ABCA3-206ENST00000569062 TIMP1P01033 207 aa23.28■■□□□ 1.32
ABCA3-206ENST00000569062 EPHB4P54760 987 aa23.28■■□□□ 1.32
ABCA3-206ENST00000569062 KRT32Q14532 448 aa23.28■■□□□ 1.32
ABCA3-206ENST00000569062 APOA5Q6Q788 366 aa23.28■■□□□ 1.32
ABCA3-206ENST00000569062 KCNB2Q92953 911 aa23.28■■□□□ 1.32
ABCA3-206ENST00000569062 ZFP91Q96JP5 570 aaPredicted RBP23.28■■□□□ 1.32
ABCA3-206ENST00000569062 BRPF3Q9ULD4 1205 aa23.28■■□□□ 1.32
ABCA3-206ENST00000569062 SCN10AQ9Y5Y9 1956 aa23.28■■□□□ 1.32
ABCA3-206ENST00000569062 hCG_1642624A0A1W2PR95 340 aa23.27■■□□□ 1.32
ABCA3-206ENST00000569062 RGS20O76081 388 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms