RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 ARHGEF16Q5VV41 709 aa19.33■□□□□ 0.68
CDR2-207ENST00000569045 SYTL5Q8TDW5 730 aaPredicted RBP19.33■□□□□ 0.68
CDR2-207ENST00000569045 TMEM265A0A087WTH1 108 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 E7EWF7 191 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 ZBTB5O15062 677 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 CFBP00751 764 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 CYP2C18P33260 490 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 PURAQ00577 322 aaKnown RBP19.32■□□□□ 0.68
CDR2-207ENST00000569045 CATIPQ7Z7H3 387 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 STAG2Q8N3U4 1231 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 TAAR1Q96RJ0 339 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.32■□□□□ 0.684e-6■■■□□ 17.8
CDR2-207ENST00000569045 TRPV6Q9H1D0 765 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 SEMA6BQ9H3T3 888 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 MAP3K20Q9NYL2 800 aaKnown RBP19.32■□□□□ 0.68
CDR2-207ENST00000569045 MAD2L2Q9UI95 211 aa19.32■□□□□ 0.68
CDR2-207ENST00000569045 GRIN2DO15399 1336 aa19.31■□□□□ 0.68
CDR2-207ENST00000569045 PALM3A6NDB9 673 aaPredicted RBP19.31■□□□□ 0.68
CDR2-207ENST00000569045 FAM47CQ5HY64 1035 aa19.31■□□□□ 0.68
CDR2-207ENST00000569045 TMEM67Q5HYA8 995 aa19.31■□□□□ 0.68
CDR2-207ENST00000569045 SEPT14Q6ZU15 432 aa19.31■□□□□ 0.68
CDR2-207ENST00000569045 SAMD3Q8N6K7 520 aa19.31■□□□□ 0.68
CDR2-207ENST00000569045 TBC1D5Q92609 795 aa19.31■□□□□ 0.68
CDR2-207ENST00000569045 ALDH8A1Q9H2A2 487 aaPredicted RBP19.31■□□□□ 0.68
CDR2-207ENST00000569045 IL23AQ9NPF7 189 aa19.31■□□□□ 0.68
CDR2-207ENST00000569045 PCDHA1Q9Y5I3 950 aa19.31■□□□□ 0.68
CDR2-207ENST00000569045 A6NJR5 290 aa19.3■□□□□ 0.68
CDR2-207ENST00000569045 B4GALT4O60513 344 aa19.3■□□□□ 0.68
CDR2-207ENST00000569045 EIF3JO75822 258 aaKnown RBP19.3■□□□□ 0.68
CDR2-207ENST00000569045 GRM4Q14833 912 aa19.3■□□□□ 0.68
CDR2-207ENST00000569045 TMEM240Q5SV17 173 aa19.3■□□□□ 0.68
CDR2-207ENST00000569045 HOMER1Q86YM7 354 aa19.3■□□□□ 0.68
CDR2-207ENST00000569045 RPUSD2Q8IZ73 545 aaKnown RBP19.3■□□□□ 0.68
CDR2-207ENST00000569045 MAP4K1Q92918 833 aa19.3■□□□□ 0.68
CDR2-207ENST00000569045 GUCD1Q96NT3 240 aa19.3■□□□□ 0.68
CDR2-207ENST00000569045 GH1P01241 217 aa19.29■□□□□ 0.68
CDR2-207ENST00000569045 FGBP02675 491 aa19.29■□□□□ 0.68
CDR2-207ENST00000569045 EIF2AK2P19525 551 aaKnown RBP19.29■□□□□ 0.68
CDR2-207ENST00000569045 CASC1Q6TDU7 716 aa19.29■□□□□ 0.68
CDR2-207ENST00000569045 ZNF365Q70YC5 407 aa19.29■□□□□ 0.68
CDR2-207ENST00000569045 NOC4LQ9BVI4 516 aaKnown RBP19.29■□□□□ 0.68
CDR2-207ENST00000569045 RBM8AQ9Y5S9 174 aaKnown RBP19.29■□□□□ 0.68
CDR2-207ENST00000569045 NR3C2P08235 984 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 ACRP10323 421 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 HSD17B4P51659 736 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 CCL23P55773 120 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 PTPN11Q06124 597 aaPredicted RBP19.28■□□□□ 0.68
CDR2-207ENST00000569045 NFRKBQ6P4R8 1299 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 COPS5Q92905 334 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 MTMR8Q96EF0 704 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 CDX2Q99626 313 aaPredicted RBP19.28■□□□□ 0.68
CDR2-207ENST00000569045 PXMP2Q9NR77 195 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 COL20A1Q9P218 1284 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 NOD1Q9Y239 953 aa19.28■□□□□ 0.68
CDR2-207ENST00000569045 DNAJB2P25686 324 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 KIF5BP33176 963 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 CHMP4BP1P59074 171 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 NBPF20Q3BBV1 942 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 CCDC62Q6P9F0 684 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 KCNV1Q6PIU1 500 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 C16orf59Q7L2K0 433 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 CHST3Q7LGC8 479 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
CDR2-207ENST00000569045 PIGSQ96S52 555 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 RIOX1Q9H6W3 641 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 TRMT13Q9NUP7 481 aaKnown RBP19.27■□□□□ 0.68
CDR2-207ENST00000569045 MRVI1Q9Y6F6 885 aa19.27■□□□□ 0.68
CDR2-207ENST00000569045 PNMA6FA0A0J9YX94 578 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 GCOM1H8Y6P7 765 aaPredicted RBP19.26■□□□□ 0.67
CDR2-207ENST00000569045 ARIH2O95376 493 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 CASTP20810 708 aaKnown RBP19.26■□□□□ 0.67
CDR2-207ENST00000569045 GHRHRQ02643 423 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 LY6KQ17RY6 165 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 TMTC2Q8N394 836 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 RETREG2Q8NC44 543 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 AFG1LQ8WV93 481 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 HERVK_113Q902F9 699 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 TIFAQ96CG3 184 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 MTA3Q9BTC8 594 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 TTYH1Q9H313 450 aaPredicted RBP19.26■□□□□ 0.67
CDR2-207ENST00000569045 A0A0C4DFX4 3053 aa19.26■□□□□ 0.67
CDR2-207ENST00000569045 PFKMP08237 780 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 MYCLP12524 364 aaPredicted RBP19.25■□□□□ 0.67
CDR2-207ENST00000569045 MCM5P33992 734 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 TROAPQ12815 778 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 LAMC2Q13753 1193 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 DGKDQ16760 1214 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 RASIP1Q5U651 963 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 NFXL1Q6ZNB6 911 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 STOX1Q6ZVD7 989 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 MB21D2Q8IYB1 491 aaPredicted RBP19.25■□□□□ 0.67
CDR2-207ENST00000569045 MAP3K14Q99558 947 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 MSRAQ9UJ68 235 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 UMODL1Q5DID0 1318 aa19.25■□□□□ 0.67
CDR2-207ENST00000569045 PPP1R11O60927 126 aaPredicted RBP19.24■□□□□ 0.67
CDR2-207ENST00000569045 DDAH1O94760 285 aa19.24■□□□□ 0.67
CDR2-207ENST00000569045 MMP3P08254 477 aa19.24■□□□□ 0.67
CDR2-207ENST00000569045 CYP2C9P11712 490 aa19.24■□□□□ 0.67
CDR2-207ENST00000569045 FOSL2P15408 326 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms