RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 SPZ1Q9BXG8 430 aa20.32■□□□□ 0.84
EDC3-215ENST00000569007 PDLIM7Q9NR12 457 aa20.32■□□□□ 0.84
EDC3-215ENST00000569007 Q9Y3F1 56 aa20.32■□□□□ 0.84
EDC3-215ENST00000569007 SLC12A7Q9Y666 1083 aa20.32■□□□□ 0.84
EDC3-215ENST00000569007 PLEKHA8P1O95397 391 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 CALM1P0DP23 149 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 CALM2P0DP24 149 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 CALM3P0DP25 149 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 EIF2AK2P19525 551 aaKnown RBP20.31■□□□□ 0.84
EDC3-215ENST00000569007 EXOSC10Q01780 885 aaKnown RBP20.31■□□□□ 0.84
EDC3-215ENST00000569007 KRT32Q14532 448 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 ARHGEF16Q5VV41 709 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 CXCL17Q6UXB2 119 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 DHX32Q7L7V1 743 aaKnown RBP20.31■□□□□ 0.84
EDC3-215ENST00000569007 SH3RF1Q7Z6J0 888 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 SGMS1Q86VZ5 419 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 SCFD2Q8WU76 684 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 IWS1Q96ST2 819 aa20.31■□□□□ 0.84
EDC3-215ENST00000569007 UBE2OQ9C0C9 1292 aaKnown RBP20.31■□□□□ 0.84
EDC3-215ENST00000569007 SMARCA1P28370 1054 aa20.3■□□□□ 0.84
EDC3-215ENST00000569007 HOXA13P31271 388 aaPredicted RBP20.3■□□□□ 0.84
EDC3-215ENST00000569007 GNAQP50148 359 aa20.3■□□□□ 0.84
EDC3-215ENST00000569007 PPP2R5BQ15173 497 aa20.3■□□□□ 0.84
EDC3-215ENST00000569007 ANKRD33Q7Z3H0 272 aa20.3■□□□□ 0.84
EDC3-215ENST00000569007 CMTR1Q8N1G2 835 aaKnown RBP20.3■□□□□ 0.84
EDC3-215ENST00000569007 SRBD1Q8N5C6 995 aaKnown RBP20.3■□□□□ 0.84
EDC3-215ENST00000569007 RRP36Q96EU6 259 aaKnown RBP20.3■□□□□ 0.84
EDC3-215ENST00000569007 PXMP2Q9NR77 195 aa20.3■□□□□ 0.84
EDC3-215ENST00000569007 A0A0U1RQG5 324 aaPredicted RBP20.29■□□□□ 0.84
EDC3-215ENST00000569007 TRIM43BA6NCK2 446 aa20.29■□□□□ 0.84
EDC3-215ENST00000569007 ZEB2O60315 1214 aa20.29■□□□□ 0.84
EDC3-215ENST00000569007 CLTBP09497 229 aa20.29■□□□□ 0.84
EDC3-215ENST00000569007 STXBP2Q15833 593 aa20.29■□□□□ 0.84
EDC3-215ENST00000569007 MICU3Q86XE3 530 aa20.29■□□□□ 0.84
EDC3-215ENST00000569007 KCNB2Q92953 911 aa20.29■□□□□ 0.84
EDC3-215ENST00000569007 TRIM43Q96BQ3 446 aaPredicted RBP20.29■□□□□ 0.84
EDC3-215ENST00000569007 TOX2Q96NM4 488 aa20.29■□□□□ 0.84
EDC3-215ENST00000569007 MAP3K20Q9NYL2 800 aaKnown RBP20.29■□□□□ 0.84
EDC3-215ENST00000569007 DCDC2CA8MYV0 355 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 GCOM1H8Y6P7 765 aaPredicted RBP20.28■□□□□ 0.84
EDC3-215ENST00000569007 ARVCFO00192 962 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 CABYRO75952 493 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 REC8O95072 547 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 POLR2MP0CAP2 368 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 TXNP10599 105 aaKnown RBP20.28■□□□□ 0.84
EDC3-215ENST00000569007 HSPA4P34932 840 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 CDK7P50613 346 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 TTLL4Q14679 1199 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 SYNE3Q6ZMZ3 975 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 SAMD3Q8N6K7 520 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 FANCBQ8NB91 859 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 OR6J1Q8NGC5 347 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 COPS5Q92905 334 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 SEC63Q9UGP8 760 aaKnown RBP20.28■□□□□ 0.84
EDC3-215ENST00000569007 SZT2Q5T011 3432 aa20.28■□□□□ 0.84
EDC3-215ENST00000569007 NKRFO15226 690 aaKnown RBP eCLIP20.27■□□□□ 0.84
EDC3-215ENST00000569007 ARIH2O95376 493 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 NR3C2P08235 984 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 HMGB1P09429 215 aaKnown RBP20.27■□□□□ 0.84
EDC3-215ENST00000569007 FAAP100Q0VG06 881 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 CCDC62Q6P9F0 684 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 APOA5Q6Q788 366 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 SEPT14Q6ZU15 432 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 TMEM39AQ9NV64 488 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 BRPF3Q9ULD4 1205 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 SNX14Q9Y5W7 946 aa20.27■□□□□ 0.84
EDC3-215ENST00000569007 LTBP2Q14767 1821 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 KIAA0355O15063 1070 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 EIF3JO75822 258 aaKnown RBP20.26■□□□□ 0.83
EDC3-215ENST00000569007 CPA1P15085 419 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 CPT1AP50416 773 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 TMTC3Q6ZXV5 915 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 FCHSD1Q86WN1 690 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 TDHQ8IZJ6 230 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 CCDC82Q8N4S0 544 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 BADQ92934 168 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 JAKMIP1Q96N16 626 aaKnown RBP20.26■□□□□ 0.83
EDC3-215ENST00000569007 PDCD2LQ9BRP1 358 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 MROH7Q68CQ1 1323 aa20.26■□□□□ 0.83
EDC3-215ENST00000569007 hCG_1642624A0A1W2PR95 340 aa20.25■□□□□ 0.83
EDC3-215ENST00000569007 MYCLP12524 364 aaPredicted RBP20.25■□□□□ 0.83
EDC3-215ENST00000569007 ITGB8P26012 769 aa20.25■□□□□ 0.83
EDC3-215ENST00000569007 PSMC6P62333 389 aa20.25■□□□□ 0.83
EDC3-215ENST00000569007 IL31RAQ8NI17 732 aa20.25■□□□□ 0.83
EDC3-215ENST00000569007 POLR3EQ9NVU0 708 aa20.25■□□□□ 0.83
EDC3-215ENST00000569007 GRIN2DO15399 1336 aa20.25■□□□□ 0.83
EDC3-215ENST00000569007 KLF18A0A0U1RQI7 1052 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 ZBTB43O43298 467 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 MYL3P08590 195 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 RAG1P15918 1043 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 FGD1P98174 961 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 ITGA7Q13683 1181 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 PGM5Q15124 567 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 LY6KQ17RY6 165 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 BRDTQ58F21 947 aaPredicted RBP20.24■□□□□ 0.83
EDC3-215ENST00000569007 VSIG10LQ86VR7 867 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 SLC43A3Q8NBI5 491 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 TBX21Q9UL17 535 aa20.24■□□□□ 0.83
EDC3-215ENST00000569007 A6NJR5 290 aa20.23■□□□□ 0.83
EDC3-215ENST00000569007 SOX1O00570 391 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms