RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 BADQ92934 168 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 AGBL1Q96MI9 1066 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 TTC14Q96N46 770 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 TOX2Q96NM4 488 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 LNPKQ9C0E8 428 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 AP5M1Q9H0R1 490 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 DIAPH3Q9NSV4 1193 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 RNF146Q9NTX7 359 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 TFIP11Q9UBB9 837 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 ADD3Q9UEY8 706 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 ANAPC4Q9UJX5 808 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 CCPG1Q9ULG6 757 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 ELP1O95163 1332 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 A0A0U1RQG5 324 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 PTPDC1A2A3K4 754 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 TK2O00142 265 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 ZNF213O14771 459 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 ORC4O43929 436 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 NMT2O60551 498 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 CABYRO75952 493 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 RECKO95980 971 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 OATP04181 439 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 ASGR1P07306 291 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 HSPD1P10809 573 aaKnown RBP5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 NT5C2P49902 561 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 ACLYP53396 1101 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 SNX17Q15036 470 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 SHHQ15465 462 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 BRDTQ58F21 947 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 IQSEC1Q6DN90 963 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 FAM109BQ6ICB4 259 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 ADGRD1Q6QNK2 874 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 NSMFQ6X4W1 530 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 CHD1LQ86WJ1 897 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 IQCA1Q86XH1 822 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 SPIRE2Q8WWL2 714 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 ESR2Q92731 530 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 SEZ6LQ9BYH1 1024 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 INCENPQ9NQS7 918 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 IL17RBQ9NRM6 502 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 TCP11L1Q9NUJ3 509 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 ZMIZ1Q9ULJ6 1067 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 PRR12Q9ULL5 1215 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 STXBP5LQ9Y2K9 1186 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 CCDC171Q6TFL3 1326 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 SYNRGQ9UMZ2 1314 aa5.47□□□□□ -1.53
HERPUD1-213ENST00000568358 DNAH12Q6ZR08 3092 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 TRIM43BA6NCK2 446 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 ARVCFO00192 962 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 DLL1O00548 723 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 KIAA0355O15063 1070 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 DYNC1LI2O43237 492 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 ADAMTS4O75173 837 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 TIMP1P01033 207 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 ICAM1P05362 532 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 FGRP09769 529 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 SDSP20132 328 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 CST5P28325 142 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 GJA9P57773 515 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 HAND2P61296 217 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 SMAD3P84022 425 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 CNTN2Q02246 1040 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 FPGSQ05932 587 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 NMIQ13287 307 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 PPIGQ13427 754 aaKnown RBP eCLIP5.46□□□□□ -1.541e-7■■□□□ 14.2
HERPUD1-213ENST00000568358 NAALADL2Q58DX5 795 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 AKNAD1Q5T1N1 836 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 VPS53Q5VIR6 699 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 SYDE2Q5VT97 1194 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 CWC27Q6UX04 472 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 KIAA1211Q6ZU35 1233 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 Q7L0L9 218 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 ANKRD33Q7Z3H0 272 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 SH3RF1Q7Z6J0 888 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 TLK2Q86UE8 772 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 TMEM199Q8N511 208 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 FAM133AQ8N9E0 248 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 KLHDC9Q8NEP7 349 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 GIPC2Q8TF65 315 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 UBE2Q2Q8WVN8 375 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 TRIM43Q96BQ3 446 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 RNPC3Q96LT9 517 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 FAM227BQ96M60 508 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 TMEM47Q9BQJ4 181 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 MTIF3Q9H2K0 278 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 KAT14Q9H8E8 782 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 CDHR5Q9HBB8 845 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 A1CFQ9NQ94 594 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 PDLIM7Q9NR12 457 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 MTMR10Q9NXD2 777 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 CYP39A1Q9NYL5 469 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 HCSTQ9UBK5 93 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 Q9Y3F1 56 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 MYH7BA7E2Y1 1941 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 ZMYM6O95789 1325 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 FRMPD2Q68DX3 1309 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 RAD50Q92878 1312 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms