RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SLC26A8Q96RN1 970 aa5.89□□□□□ -1.47
HERPUD1-212ENST00000567944 GPR27Q9NS67 375 aa5.89□□□□□ -1.47
HERPUD1-212ENST00000567944 TBX22Q9Y458 520 aa5.89□□□□□ -1.47
HERPUD1-212ENST00000567944 MRPL42Q9Y6G3 142 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-212ENST00000567944 NPHS1O60500 1241 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 BCL6P41182 706 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 SUMO1P63165 101 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 ZC3H12BQ5HYM0 836 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 NOP9Q86U38 636 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 DCAF4Q8WV16 495 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 CDC6Q99741 560 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 PHF20Q9BVI0 1012 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 SLC6A17Q9H1V8 727 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 TMEM260Q9NX78 707 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 KLHL14Q9P2G3 628 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 TRAF6Q9Y4K3 522 aa5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 TIMM13Q9Y5L4 95 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-212ENST00000567944 ESYT3A0FGR9 886 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 C8AP07357 584 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 DBHP09172 617 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 FPR2P25090 351 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 YBX1P67809 324 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 ADGRF1Q5T601 910 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 RSPO2Q6UXX9 243 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 IRF2BP1Q8IU81 584 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 TEX2Q8IWB9 1127 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 NLGN1Q8N2Q7 840 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 LZTR1Q8N653 840 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 ZNF552Q9H707 407 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 PPARGC1AQ9UBK2 798 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 PCDHA2Q9Y5H9 948 aa5.87□□□□□ -1.47
HERPUD1-212ENST00000567944 MYOCOSA0A1B0GUC4 107 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 PPP1R12AO14974 1030 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 FUCA1P04066 466 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 MESP2Q0VG99 397 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 CBX2Q14781 532 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 TRIM61Q5EBN2 209 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 LBX2Q6XYB7 198 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 GSTCDQ8NEC7 633 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 SLC7A14Q8TBB6 771 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 CLUHP3Q96NS8 147 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 MARCH2Q9P0N8 246 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 HCFC2Q9Y5Z7 792 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 X6R8D5 127 aa5.86□□□□□ -1.47
HERPUD1-212ENST00000567944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 C22orf46C9J442 243 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 KCNQ2O43526 872 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 RPL11P62913 178 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 LSAMPQ13449 338 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 MLANAQ16655 118 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 BICRALQ6AI39 1079 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 MPZL3Q6UWV2 235 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 RPTNQ6XPR3 784 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 CEP68Q76N32 757 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 PTPRN2Q92932 1015 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 DIRC2Q96SL1 478 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 ZFYVE21Q9BQ24 234 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 SLC52A2Q9HAB3 445 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 RXFP1Q9HBX9 757 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 NCOA5Q9HCD5 579 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 BTG4Q9NY30 223 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 PLA2G2DQ9UNK4 145 aa5.85□□□□□ -1.47
HERPUD1-212ENST00000567944 CCDC163A0A0D9SF12 145 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 A0A1W2PQ27 194 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 A0A1W2PQ64 194 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 A0A1W2PQC6 194 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 A0A1W2PQD8 194 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 LRRC10BA6NIK2 292 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 NUDT19A8MXV4 375 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 NTRK1P04629 796 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 CYBBP04839 570 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 PDE6BP35913 854 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 ARL4AP40617 200 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 GPR85P60893 370 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 GABREP78334 506 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 TKFCQ3LXA3 575 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 PAQR3Q6TCH7 311 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 SCLYQ96I15 445 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 NSUN3Q9H649 340 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 TRIM39Q9HCM9 518 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 FAM53CQ9NYF3 392 aa5.84□□□□□ -1.47
HERPUD1-212ENST00000567944 TLDC2A0PJX2 215 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 ZC3H12DA2A288 527 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 OR14I1A6ND48 311 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 H7BY64 318 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 HRKO00198 91 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 KRT1P04264 644 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 MPOP05164 745 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 VIPR1P32241 457 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 GTF2A2P52657 109 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 RAB3GAP1Q15042 981 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 WWC2Q6AWC2 1192 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 MAMDC2Q7Z304 686 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 ZNF605Q86T29 641 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 RIOX2Q8IUF8 465 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 IFNL3Q8IZI9 196 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms