RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 TIMP1P01033 207 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 ICAM1P05362 532 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
CDH13-210ENST00000567445 CDK7P50613 346 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 CCDC96Q2M329 555 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 MUM1L1Q5H9M0 696 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 RRP12Q5JTH9 1297 aaKnown RBP10.82□□□□□ -0.68
CDH13-210ENST00000567445 BTNL9Q6UXG8 535 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 NOL8Q76FK4 1167 aaKnown RBP10.82□□□□□ -0.68
CDH13-210ENST00000567445 RNPC3Q96LT9 517 aaKnown RBP10.82□□□□□ -0.68
CDH13-210ENST00000567445 TMEM47Q9BQJ4 181 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 LNPKQ9C0E8 428 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 RANBP17Q9H2T7 1088 aaKnown RBP10.82□□□□□ -0.68
CDH13-210ENST00000567445 SEMA6BQ9H3T3 888 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 TCP11L1Q9NUJ3 509 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 TBX21Q9UL17 535 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 GNEQ9Y223 722 aaKnown RBP10.82□□□□□ -0.68
CDH13-210ENST00000567445 ASTN1O14525 1302 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 UNC80Q8N2C7 3258 aa10.82□□□□□ -0.68
CDH13-210ENST00000567445 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 ARVCFO00192 962 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 PCP11498 1178 aaKnown RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 NMIQ13287 307 aaPredicted RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 TTBK2Q6IQ55 1244 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 NSMFQ6X4W1 530 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 ZNF589Q86UQ0 364 aaPredicted RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 TATDN2Q93075 761 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 CDX2Q99626 313 aaPredicted RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 CCDC171Q6TFL3 1326 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 CDH23Q9H251 3354 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 SLC16A2P36021 539 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 MFAP1P55081 439 aaKnown RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 HAND2P61296 217 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 BEX3Q00994 111 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 FSCN1Q16658 493 aaKnown RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 SYDE2Q5VT97 1194 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 MFSD5Q6N075 450 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 TLK2Q86UE8 772 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 SMC5Q8IY18 1101 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 RILPL2Q969X0 211 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 TTC14Q96N46 770 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 AP5M1Q9H0R1 490 aa10.81□□□□□ -0.68
CDH13-210ENST00000567445 RWDD1Q9H446 243 aaPredicted RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 TSR3Q9UJK0 312 aaKnown RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 DDX49Q9Y6V7 483 aaKnown RBP10.81□□□□□ -0.68
CDH13-210ENST00000567445 LRRC37A2A6NM11 1700 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 FRMPD2Q68DX3 1309 aaPredicted RBP10.8□□□□□ -0.68
CDH13-210ENST00000567445 SMAPO00193 183 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 TLR3O15455 904 aaKnown RBP10.8□□□□□ -0.68
CDH13-210ENST00000567445 ZEB2O60315 1214 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 CABYRO75952 493 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 SMPD1P17405 629 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 MLLT3P42568 568 aaPredicted RBP10.8□□□□□ -0.68
CDH13-210ENST00000567445 IQSEC1Q6DN90 963 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 TAPT1Q6NXT6 567 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 MFSD6Q6ZSS7 791 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 EEPD1Q7L9B9 569 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 FBXO16Q8IX29 292 aaPredicted RBP10.8□□□□□ -0.68
CDH13-210ENST00000567445 FAM126BQ8IXS8 530 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 MORC4Q8TE76 937 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 PURBQ96QR8 312 aaKnown RBP10.8□□□□□ -0.68
CDH13-210ENST00000567445 TTYH1Q9H313 450 aaPredicted RBP10.8□□□□□ -0.68
CDH13-210ENST00000567445 VTA1Q9NP79 307 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 GPCPD1Q9NPB8 672 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 PDGFCQ9NRA1 345 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 PNMA2Q9UL42 364 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 Q9Y3F1 56 aa10.8□□□□□ -0.68
CDH13-210ENST00000567445 LCTP09848 1927 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 EYSQ5T1H1 3165 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 TMEM265A0A087WTH1 108 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 LOC102724159A0A0B4J2E5 919 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.79□□□□□ -0.68
CDH13-210ENST00000567445 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.79□□□□□ -0.68
CDH13-210ENST00000567445 NFIBO00712 420 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 DYNC1LI2O43237 492 aaPredicted RBP10.79□□□□□ -0.68
CDH13-210ENST00000567445 CD4P01730 458 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 PDHBP11177 359 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 SDSP20132 328 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 PPIGQ13427 754 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDH13-210ENST00000567445 BAATQ14032 418 aaPredicted RBP10.79□□□□□ -0.68
CDH13-210ENST00000567445 PWP2Q15269 919 aaKnown RBP10.79□□□□□ -0.68
CDH13-210ENST00000567445 B4GALNT3Q6L9W6 998 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 CXCL17Q6UXB2 119 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 CHD1LQ86WJ1 897 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 TBC1D10CQ8IV04 446 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 PLEKHM2Q8IWE5 1019 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDH13-210ENST00000567445 TMEM199Q8N511 208 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 SLC43A3Q8NBI5 491 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDH13-210ENST00000567445 SEZ6LQ9BYH1 1024 aa10.79□□□□□ -0.68
CDH13-210ENST00000567445 RNF41Q9H4P4 317 aaPredicted RBP10.79□□□□□ -0.68
CDH13-210ENST00000567445 ADD3Q9UEY8 706 aaKnown RBP10.79□□□□□ -0.68
CDH13-210ENST00000567445 PTPDC1A2A3K4 754 aa10.78□□□□□ -0.68
CDH13-210ENST00000567445 SNHG28P0DPA3 235 aa10.78□□□□□ -0.68
CDH13-210ENST00000567445 CSF2RAP15509 400 aa10.78□□□□□ -0.68
CDH13-210ENST00000567445 ALDH5A1P51649 535 aaPredicted RBP10.78□□□□□ -0.68
CDH13-210ENST00000567445 NUCB1Q02818 461 aa10.78□□□□□ -0.68
CDH13-210ENST00000567445 ZNF543Q08ER8 600 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms