RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 COL20A1Q9P218 1284 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 PRUNE2Q8WUY3 3088 aa16.6■□□□□ 0.25
COMMD4-216ENST00000567023 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-216ENST00000567023 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-216ENST00000567023 E7EWF7 191 aa16.59■□□□□ 0.25
COMMD4-216ENST00000567023 DHX16O60231 1041 aaKnown RBP16.59■□□□□ 0.25
COMMD4-216ENST00000567023 TXNP10599 105 aaKnown RBP16.59■□□□□ 0.25
COMMD4-216ENST00000567023 PSMC6P62333 389 aa16.59■□□□□ 0.25
COMMD4-216ENST00000567023 TTLL4Q14679 1199 aa16.59■□□□□ 0.25
COMMD4-216ENST00000567023 BRDTQ58F21 947 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-216ENST00000567023 SAMD3Q8N6K7 520 aa16.59■□□□□ 0.25
COMMD4-216ENST00000567023 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
COMMD4-216ENST00000567023 RMDN3Q96TC7 470 aa16.59■□□□□ 0.25
COMMD4-216ENST00000567023 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-216ENST00000567023 TRPV6Q9H1D0 765 aa16.59■□□□□ 0.25
COMMD4-216ENST00000567023 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-216ENST00000567023 HIPK3Q9H422 1215 aa16.59■□□□□ 0.25
COMMD4-216ENST00000567023 OPLAHO14841 1288 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
COMMD4-216ENST00000567023 ZBTB5O15062 677 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 CYP2C18P33260 490 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 HSD17B4P51659 736 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 TROAPQ12815 778 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 STXBP2Q15833 593 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 PSRC1Q6PGN9 363 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-216ENST00000567023 RALYLQ86SE5 291 aaKnown RBP16.58■□□□□ 0.24
COMMD4-216ENST00000567023 FAM161BQ96MY7 647 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 PPP1R12CQ9BZL4 782 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 TTYH1Q9H313 450 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-216ENST00000567023 RIOX1Q9H6W3 641 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 GPHNQ9NQX3 736 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-216ENST00000567023 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 MYH6P13533 1939 aa16.58■□□□□ 0.24
COMMD4-216ENST00000567023 ERICH2A1L162 156 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 PPP1R11O60927 126 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-216ENST00000567023 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
COMMD4-216ENST00000567023 ARIH2O95376 493 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 SUPT20HL2P0C7V6 817 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 TRAF1Q13077 416 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 GRM4Q14833 912 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 SART3Q15020 963 aaKnown RBP16.57■□□□□ 0.24
COMMD4-216ENST00000567023 NFRKBQ6P4R8 1299 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 STOX1Q6ZVD7 989 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 IGDCC4Q8TDY8 1250 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 COPS5Q92905 334 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-216ENST00000567023 NOC4LQ9BVI4 516 aaKnown RBP16.57■□□□□ 0.24
COMMD4-216ENST00000567023 IL23AQ9NPF7 189 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 SCN10AQ9Y5Y9 1956 aa16.57■□□□□ 0.24
COMMD4-216ENST00000567023 CFBP00751 764 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 MYL3P08590 195 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 WTAPQ15007 396 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 SLC35G1Q2M3R5 365 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 ARHGEF16Q5VV41 709 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 ZNF365Q70YC5 407 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 HERVK_113Q902F9 699 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 MTA3Q9BTC8 594 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 SENP2Q9HC62 589 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 PXMP2Q9NR77 195 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 VCANP13611 3396 aa16.56■□□□□ 0.24
COMMD4-216ENST00000567023 UMODL1Q5DID0 1318 aa16.55■□□□□ 0.24
COMMD4-216ENST00000567023 CYTH3O43739 400 aa16.55■□□□□ 0.24
COMMD4-216ENST00000567023 NR3C2P08235 984 aa16.55■□□□□ 0.24
COMMD4-216ENST00000567023 ACRP10323 421 aa16.55■□□□□ 0.24
COMMD4-216ENST00000567023 PTPN11Q06124 597 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-216ENST00000567023 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
COMMD4-216ENST00000567023 SEPT14Q6ZU15 432 aa16.55■□□□□ 0.24
COMMD4-216ENST00000567023 MB21D2Q8IYB1 491 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-216ENST00000567023 EMID1Q96A84 441 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-216ENST00000567023 WNT8AQ9H1J5 351 aa16.55■□□□□ 0.24
COMMD4-216ENST00000567023 TRMT13Q9NUP7 481 aaKnown RBP16.55■□□□□ 0.24
COMMD4-216ENST00000567023 DDX41Q9UJV9 622 aaKnown RBP16.55■□□□□ 0.24
COMMD4-216ENST00000567023 RBM8AQ9Y5S9 174 aaKnown RBP16.55■□□□□ 0.24
COMMD4-216ENST00000567023 GH1P01241 217 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 DNAJB2P25686 324 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 ANTXR2P58335 489 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 ARHGAP1Q07960 439 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 LY6KQ17RY6 165 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 CHST3Q7LGC8 479 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 CATIPQ7Z7H3 387 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 VWCEQ96DN2 955 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 KIAA1217Q5T5P2 1943 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 CHD9Q3L8U1 2897 aa16.54■□□□□ 0.24
COMMD4-216ENST00000567023 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
COMMD4-216ENST00000567023 FGBP02675 491 aa16.53■□□□□ 0.24
COMMD4-216ENST00000567023 EIF2AK2P19525 551 aaKnown RBP16.53■□□□□ 0.24
COMMD4-216ENST00000567023 SMARCA1P28370 1054 aa16.53■□□□□ 0.24
COMMD4-216ENST00000567023 CCL23P55773 120 aa16.53■□□□□ 0.24
COMMD4-216ENST00000567023 RPUSD2Q8IZ73 545 aaKnown RBP16.53■□□□□ 0.24
COMMD4-216ENST00000567023 AFG1LQ8WV93 481 aa16.53■□□□□ 0.24
COMMD4-216ENST00000567023 PIGSQ96S52 555 aa16.53■□□□□ 0.24
COMMD4-216ENST00000567023 PDCD2LQ9BRP1 358 aa16.53■□□□□ 0.24
COMMD4-216ENST00000567023 LSG1Q9H089 658 aaKnown RBP16.53■□□□□ 0.24
COMMD4-216ENST00000567023 MTIF3Q9H2K0 278 aaKnown RBP16.53■□□□□ 0.24
COMMD4-216ENST00000567023 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 MMP3P08254 477 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 CYP2C9P11712 490 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms