RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 PCDHA12Q9UN75 941 aa14.95□□□□□ -0.02
LINC00563-201ENST00000566370 ZNF646O15015 1829 aaPredicted RBP14.95□□□□□ -0.02
LINC00563-201ENST00000566370 SIPA1L1O43166 1804 aa14.95□□□□□ -0.02
LINC00563-201ENST00000566370 DDTLA6NHG4 134 aaPredicted RBP14.94□□□□□ -0.02
LINC00563-201ENST00000566370 SPDYE3A6NKU9 549 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 KIF5CO60282 957 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 TDP2O95551 362 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 BMP3P12645 472 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 CASP14P31944 242 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 MTIF2P46199 727 aaKnown RBP14.94□□□□□ -0.02
LINC00563-201ENST00000566370 TUBB2AQ13885 445 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 DLGAP5Q15398 846 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 UBE2SQ16763 222 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 SYDE2Q5VT97 1194 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 TTBK2Q6IQ55 1244 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 FOXR2Q6PJQ5 311 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 ZNF397Q8NF99 534 aaPredicted RBP14.94□□□□□ -0.02
LINC00563-201ENST00000566370 CPLX3Q8WVH0 158 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 CSRNP1Q96S65 589 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 PSMD1Q99460 953 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 TUBB2BQ9BVA1 445 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 ANO3Q9BYT9 981 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 L2HGDHQ9H9P8 463 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 ABCB11O95342 1321 aa14.94□□□□□ -0.02
LINC00563-201ENST00000566370 F5H6K3 240 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 TBX3O15119 743 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 PRKCSHP14314 528 aaPredicted RBP14.93□□□□□ -0.02
LINC00563-201ENST00000566370 CACNB3P54284 484 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 LRRC63Q05C16 580 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 KLRC3Q07444 240 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 GRB10Q13322 594 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 RSBN1LQ6PCB5 846 aaPredicted RBP14.93□□□□□ -0.02
LINC00563-201ENST00000566370 REXO1L1PQ8IX06 675 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 KCTD17Q8N5Z5 321 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 MB21D1Q8N884 522 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 TDRD3Q9H7E2 651 aaKnown RBP14.93□□□□□ -0.02
LINC00563-201ENST00000566370 DNAJC18Q9H819 358 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC00563-201ENST00000566370 MAPK8IP1Q9UQF2 711 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 LUC7L2Q9Y383 392 aaKnown RBP14.93□□□□□ -0.02
LINC00563-201ENST00000566370 SCN9AQ15858 1988 aa14.93□□□□□ -0.02
LINC00563-201ENST00000566370 SLC37A4O43826 429 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 IPO7O95373 1038 aaKnown RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 MMP14P50281 582 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 GNG11P61952 73 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 TMEM119Q4V9L6 283 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 ARHGAP29Q52LW3 1261 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 TTI2Q6NXR4 508 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 ZFPM1Q8IX07 1006 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 CCDC65Q8IXS2 484 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 LARGE2Q8N3Y3 721 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 GUF1Q8N442 669 aaKnown RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 FAM151AQ8WW52 585 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 MMTAG2Q9BU76 263 aaKnown RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 CYP3A7-CYP3A51PA0A087WV96 503 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 PPP1R11O60927 126 aaPredicted RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 URI1O94763 535 aaPredicted RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 GYPCP04921 128 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 FECHP22830 423 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 CYP3A7P24462 503 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 BAG6P46379 1132 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 TUBB4BP68371 445 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 GOLGA8FQ08AF8 430 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 NCBP1Q09161 790 aaKnown RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 GOLGA8DPQ0D2H9 430 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 HYIQ5T013 277 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 FKBP1CQ5VVH2 108 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 BTNL9Q6UXG8 535 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 OR8K1Q8NGG5 319 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 SLC16A10Q8TF71 515 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 PCMTD1Q96MG8 357 aaPredicted RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 TUBGCP2Q9BSJ2 902 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 KCNQ5Q9NR82 932 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 ABHD10Q9NUJ1 306 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 ARGLU1Q9NWB6 273 aaPredicted RBP14.92□□□□□ -0.02
LINC00563-201ENST00000566370 MYO1AQ9UBC5 1043 aa14.92□□□□□ -0.02
LINC00563-201ENST00000566370 C21orf2O43822 256 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 GDF11O95390 407 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 NDUFB10O96000 172 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 GH2P01242 217 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 IDEP14735 1019 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 KRT9P35527 623 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 MCM6Q14566 821 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 SH3BP5LQ7L8J4 393 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 CHURC1Q8WUH1 139 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 CNOT6LQ96LI5 555 aaKnown RBP14.91□□□□□ -0.02
LINC00563-201ENST00000566370 PNMA5Q96PV4 448 aa14.91□□□□□ -0.02
LINC00563-201ENST00000566370 CCDC94Q9BW85 323 aaPredicted RBP14.91□□□□□ -0.02
LINC00563-201ENST00000566370 ZNF215Q9UL58 517 aaPredicted RBP14.91□□□□□ -0.02
LINC00563-201ENST00000566370 MYH7BA7E2Y1 1941 aa14.9□□□□□ -0.02
LINC00563-201ENST00000566370 TRIM49BA6NDI0 452 aa14.9□□□□□ -0.02
LINC00563-201ENST00000566370 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
LINC00563-201ENST00000566370 POTEMA6NI47 508 aa14.9□□□□□ -0.02
LINC00563-201ENST00000566370 FAM196BA6NMK8 535 aa14.9□□□□□ -0.02
LINC00563-201ENST00000566370 KRT18P05783 430 aaKnown RBP14.9□□□□□ -0.02
LINC00563-201ENST00000566370 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
LINC00563-201ENST00000566370 CYLC1P35663 651 aaPredicted RBP14.9□□□□□ -0.02
LINC00563-201ENST00000566370 ZNF76P36508 570 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms