RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 OPLAHO14841 1288 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 ACRP10323 421 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 MRPL12P52815 198 aaKnown RBP21.35■■□□□ 1.01
USB1-213ENST00000566292 TRDNQ13061 729 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 SLC35G1Q2M3R5 365 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 RASIP1Q5U651 963 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 STOX1Q6ZVD7 989 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 MCF2L2Q86YR7 1114 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 MTMR8Q96EF0 704 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 CDX2Q99626 313 aaPredicted RBP21.35■■□□□ 1.01
USB1-213ENST00000566292 NOC4LQ9BVI4 516 aaKnown RBP21.35■■□□□ 1.01
USB1-213ENST00000566292 ALDH8A1Q9H2A2 487 aaPredicted RBP21.35■■□□□ 1.01
USB1-213ENST00000566292 SENP2Q9HC62 589 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 MYH7BA7E2Y1 1941 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 GBF1Q92538 1859 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.34■■□□□ 1.01
USB1-213ENST00000566292 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.34■■□□□ 1.01
USB1-213ENST00000566292 E7EWF7 191 aa21.34■■□□□ 1.01
USB1-213ENST00000566292 PPP1R11O60927 126 aaPredicted RBP21.34■■□□□ 1.01
USB1-213ENST00000566292 TXNP10599 105 aaKnown RBP21.34■■□□□ 1.01
USB1-213ENST00000566292 ZNF365Q70YC5 407 aa21.34■■□□□ 1.01
USB1-213ENST00000566292 NSUN6Q8TEA1 469 aaKnown RBP21.34■■□□□ 1.01
USB1-213ENST00000566292 SCN5AQ14524 2016 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 A6NJR5 290 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 TTLL4Q14679 1199 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 GRM4Q14833 912 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 CCDC62Q6P9F0 684 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 RMDN3Q96TC7 470 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 MTG1Q9BT17 334 aaPredicted RBP21.33■■□□□ 1.01
USB1-213ENST00000566292 AMNQ9BXJ7 453 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 WNT8AQ9H1J5 351 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 IL23AQ9NPF7 189 aa21.33■■□□□ 1.01
USB1-213ENST00000566292 IFIT3O14879 490 aaKnown RBP21.32■■□□□ 1
USB1-213ENST00000566292 CFBP00751 764 aa21.32■■□□□ 1
USB1-213ENST00000566292 DNAJB2P25686 324 aa21.32■■□□□ 1
USB1-213ENST00000566292 CCL23P55773 120 aa21.32■■□□□ 1
USB1-213ENST00000566292 PSRC1Q6PGN9 363 aaPredicted RBP21.32■■□□□ 1
USB1-213ENST00000566292 SEPT14Q6ZU15 432 aa21.32■■□□□ 1
USB1-213ENST00000566292 CHST3Q7LGC8 479 aa21.32■■□□□ 1
USB1-213ENST00000566292 NCOA7Q8NI08 942 aa21.32■■□□□ 1
USB1-213ENST00000566292 PPP1R13LQ8WUF5 828 aa21.32■■□□□ 1
USB1-213ENST00000566292 MAP4K1Q92918 833 aa21.32■■□□□ 1
USB1-213ENST00000566292 IWS1Q96ST2 819 aa21.32■■□□□ 1
USB1-213ENST00000566292 GPHNQ9NQX3 736 aaPredicted RBP21.32■■□□□ 1
USB1-213ENST00000566292 TRMT13Q9NUP7 481 aaKnown RBP21.32■■□□□ 1
USB1-213ENST00000566292 A0A0C4DFX4 3053 aa21.31■■□□□ 1
USB1-213ENST00000566292 TMEM265A0A087WTH1 108 aa21.31■■□□□ 1
USB1-213ENST00000566292 ZBTB5O15062 677 aa21.31■■□□□ 1
USB1-213ENST00000566292 EIF2AK2P19525 551 aaKnown RBP21.31■■□□□ 1
USB1-213ENST00000566292 HSD17B4P51659 736 aa21.31■■□□□ 1
USB1-213ENST00000566292 ANTXR2P58335 489 aa21.31■■□□□ 1
USB1-213ENST00000566292 GHRHRQ02643 423 aa21.31■■□□□ 1
USB1-213ENST00000566292 NBPF20Q3BBV1 942 aa21.31■■□□□ 1
USB1-213ENST00000566292 BRDTQ58F21 947 aaPredicted RBP21.31■■□□□ 1
USB1-213ENST00000566292 RALYLQ86SE5 291 aaKnown RBP21.31■■□□□ 1
USB1-213ENST00000566292 MYLIPQ8WY64 445 aa21.31■■□□□ 1
USB1-213ENST00000566292 RIOX1Q9H6W3 641 aa21.31■■□□□ 1
USB1-213ENST00000566292 PXMP2Q9NR77 195 aa21.31■■□□□ 1
USB1-213ENST00000566292 EYSQ5T1H1 3165 aa21.3■■□□□ 1
USB1-213ENST00000566292 UNC80Q8N2C7 3258 aa21.3■■□□□ 1
USB1-213ENST00000566292 GRXCR1A8MXD5 290 aa21.3■■□□□ 1
USB1-213ENST00000566292 CYP2C9P11712 490 aa21.3■■□□□ 1
USB1-213ENST00000566292 TROAPQ12815 778 aa21.3■■□□□ 1
USB1-213ENST00000566292 WTAPQ15007 396 aa21.3■■□□□ 1
USB1-213ENST00000566292 STXBP2Q15833 593 aa21.3■■□□□ 1
USB1-213ENST00000566292 LY6KQ17RY6 165 aa21.3■■□□□ 1
USB1-213ENST00000566292 ARHGEF16Q5VV41 709 aa21.3■■□□□ 1
USB1-213ENST00000566292 MB21D2Q8IYB1 491 aaPredicted RBP21.3■■□□□ 1
USB1-213ENST00000566292 HERVK_113Q902F9 699 aa21.3■■□□□ 1
USB1-213ENST00000566292 VWCEQ96DN2 955 aa21.3■■□□□ 1
USB1-213ENST00000566292 RBM8AQ9Y5S9 174 aaKnown RBP21.3■■□□□ 1
USB1-213ENST00000566292 TANC1Q9C0D5 1861 aa21.3■■□□□ 1
USB1-213ENST00000566292 TRIP12Q14669 1992 aaPredicted RBP21.29■■□□□ 1
USB1-213ENST00000566292 ERICH2A1L162 156 aa21.29■■□□□ 1
USB1-213ENST00000566292 CYTH3O43739 400 aa21.29■■□□□ 1
USB1-213ENST00000566292 KPNA6O60684 536 aa21.29■■□□□ 1
USB1-213ENST00000566292 NR3C2P08235 984 aa21.29■■□□□ 1
USB1-213ENST00000566292 ARHGAP1Q07960 439 aa21.29■■□□□ 1
USB1-213ENST00000566292 HOMER1Q86YM7 354 aa21.29■■□□□ 1
USB1-213ENST00000566292 AFG1LQ8WV93 481 aa21.29■■□□□ 1
USB1-213ENST00000566292 SCLYQ96I15 445 aa21.29■■□□□ 1
USB1-213ENST00000566292 PIGSQ96S52 555 aa21.29■■□□□ 1
USB1-213ENST00000566292 CXXC1Q9P0U4 656 aaPredicted RBP21.29■■□□□ 1
USB1-213ENST00000566292 PCDHA1Q9Y5I3 950 aa21.29■■□□□ 1
USB1-213ENST00000566292 GH1P01241 217 aa21.28■■□□□ 1
USB1-213ENST00000566292 MMP3P08254 477 aa21.28■■□□□ 1
USB1-213ENST00000566292 SUPT20HL2P0C7V6 817 aa21.28■■□□□ 1
USB1-213ENST00000566292 PBX2P40425 430 aa21.28■■□□□ 1
USB1-213ENST00000566292 FAM47CQ5HY64 1035 aa21.28■■□□□ 1
USB1-213ENST00000566292 NFRKBQ6P4R8 1299 aa21.28■■□□□ 1
USB1-213ENST00000566292 IGDCC4Q8TDY8 1250 aa21.28■■□□□ 1
USB1-213ENST00000566292 PBX4Q9BYU1 374 aa21.28■■□□□ 1
USB1-213ENST00000566292 MYO9BQ13459 2157 aa21.27■■□□□ 1
USB1-213ENST00000566292 EIF3JO75822 258 aaKnown RBP21.27■■□□□ 1
USB1-213ENST00000566292 FGBP02675 491 aa21.27■■□□□ 1
USB1-213ENST00000566292 HOXA13P31271 388 aaPredicted RBP21.27■■□□□ 1
USB1-213ENST00000566292 GRIN2CQ14957 1233 aa21.27■■□□□ 1
USB1-213ENST00000566292 SART3Q15020 963 aaKnown RBP21.27■■□□□ 1
USB1-213ENST00000566292 TMEM67Q5HYA8 995 aa21.27■■□□□ 1
USB1-213ENST00000566292 OTOP2Q7RTS6 562 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms