RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 MBD4O95243 580 aa19.92■□□□□ 0.78
CLK3-217ENST00000566126 ID4P47928 161 aa19.92■□□□□ 0.78
CLK3-217ENST00000566126 RBL2Q08999 1139 aa19.92■□□□□ 0.78
CLK3-217ENST00000566126 TTF1Q15361 905 aaPredicted RBP19.92■□□□□ 0.78
CLK3-217ENST00000566126 ARHGAP45Q92619 1136 aa19.92■□□□□ 0.78
CLK3-217ENST00000566126 TRERF1Q96PN7 1200 aa19.92■□□□□ 0.78
CLK3-217ENST00000566126 TLR9Q9NR96 1032 aa19.92■□□□□ 0.78
CLK3-217ENST00000566126 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
CLK3-217ENST00000566126 GVINP1Q7Z2Y8 2422 aa19.92■□□□□ 0.78
CLK3-217ENST00000566126 KMT2BQ9UMN6 2715 aaPredicted RBP19.91■□□□□ 0.78
CLK3-217ENST00000566126 PRR23AA6NEV1 266 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 PARNO95453 639 aaKnown RBP19.91■□□□□ 0.78
CLK3-217ENST00000566126 AVPR2P30518 371 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 SMAD4Q13485 552 aaKnown RBP19.91■□□□□ 0.78
CLK3-217ENST00000566126 IKBKEQ14164 716 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 MUM1L1Q5H9M0 696 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 GDF6Q6KF10 455 aaPredicted RBP19.91■□□□□ 0.78
CLK3-217ENST00000566126 CTR9Q6PD62 1173 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 SAMD11Q96NU1 681 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 FSD1Q9BTV5 496 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 CLIP2Q9UDT6 1046 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 EPG5Q9HCE0 2579 aa19.91■□□□□ 0.78
CLK3-217ENST00000566126 DNAH14Q0VDD8 3507 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 RALGAPA2Q2PPJ7 1873 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 A6NJR5 290 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 RGS20O76081 388 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 FDX1P10109 184 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 CKBP12277 381 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 RASA1P20936 1047 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 ATP8B2P98198 1209 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 MKRN4PQ13434 485 aaPredicted RBP19.9■□□□□ 0.78
CLK3-217ENST00000566126 TKFCQ3LXA3 575 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 TRAF7Q6Q0C0 670 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 AMOTL1Q8IY63 956 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 TNNQ9UQP3 1299 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 TRPC6Q9Y210 931 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 ZBED9Q6R2W3 1325 aa19.9■□□□□ 0.78
CLK3-217ENST00000566126 IGKV6D-41A0A0C4DH26 115 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 NCK2O43639 380 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 KPNA6O60684 536 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 TBX10O75333 385 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 KRT37O76014 449 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 ALAS1P13196 640 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 HYAL1Q12794 435 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 BRDTQ58F21 947 aaPredicted RBP19.89■□□□□ 0.77
CLK3-217ENST00000566126 ASIC4Q96FT7 647 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 DMXL1Q9Y485 3027 aa19.89■□□□□ 0.77
CLK3-217ENST00000566126 CHMP4BP1P59074 171 aa19.88■□□□□ 0.77
CLK3-217ENST00000566126 MBTPS1Q14703 1052 aa19.88■□□□□ 0.77
CLK3-217ENST00000566126 RPAP2Q8IXW5 612 aaPredicted RBP19.88■□□□□ 0.77
CLK3-217ENST00000566126 TMEM192Q8IY95 271 aa19.88■□□□□ 0.77
CLK3-217ENST00000566126 COPS5Q92905 334 aa19.88■□□□□ 0.77
CLK3-217ENST00000566126 MKL1Q969V6 931 aa19.88■□□□□ 0.77
CLK3-217ENST00000566126 GOLIM4O00461 696 aa19.87■□□□□ 0.77
CLK3-217ENST00000566126 BMP3P12645 472 aa19.87■□□□□ 0.77
CLK3-217ENST00000566126 ALDH5A1P51649 535 aaPredicted RBP19.87■□□□□ 0.77
CLK3-217ENST00000566126 SIGLEC14Q08ET2 396 aa19.87■□□□□ 0.77
CLK3-217ENST00000566126 SESTD1Q86VW0 696 aa19.87■□□□□ 0.77
CLK3-217ENST00000566126 FBXO11Q86XK2 927 aa19.87■□□□□ 0.77
CLK3-217ENST00000566126 TRMT2AQ8IZ69 625 aaKnown RBP19.87■□□□□ 0.77
CLK3-217ENST00000566126 MYOCDQ8IZQ8 938 aa19.87■□□□□ 0.77
CLK3-217ENST00000566126 GMCL1P1Q8NEA9 526 aa19.87■□□□□ 0.77
CLK3-217ENST00000566126 ZNF292O60281 2723 aa19.86■□□□□ 0.77
CLK3-217ENST00000566126 RAD50Q92878 1312 aa19.86■□□□□ 0.77
CLK3-217ENST00000566126 LOC730098B7Z3J9 87 aa19.86■□□□□ 0.77
CLK3-217ENST00000566126 TMEM232C9JQI7 657 aa19.86■□□□□ 0.77
CLK3-217ENST00000566126 CHGBP05060 677 aa19.86■□□□□ 0.77
CLK3-217ENST00000566126 CT47B1P0C2W7 299 aaPredicted RBP19.86■□□□□ 0.77
CLK3-217ENST00000566126 GTF2F1P35269 517 aaKnown RBP eCLIP19.86■□□□□ 0.77
CLK3-217ENST00000566126 NSMFQ6X4W1 530 aa19.86■□□□□ 0.77
CLK3-217ENST00000566126 AACSQ86V21 672 aa19.86■□□□□ 0.77
CLK3-217ENST00000566126 LRRC47Q8N1G4 583 aaKnown RBP19.86■□□□□ 0.77
CLK3-217ENST00000566126 CD207Q9UJ71 328 aa19.86■□□□□ 0.77
CLK3-217ENST00000566126 ZFHX4Q86UP3 3567 aa19.85■□□□□ 0.77
CLK3-217ENST00000566126 AMHP03971 560 aa19.85■□□□□ 0.77
CLK3-217ENST00000566126 ADD2P35612 726 aa19.85■□□□□ 0.77
CLK3-217ENST00000566126 NBL1P41271 181 aa19.85■□□□□ 0.77
CLK3-217ENST00000566126 RARSP54136 660 aaKnown RBP19.85■□□□□ 0.77
CLK3-217ENST00000566126 SNAP25P60880 206 aa19.85■□□□□ 0.77
CLK3-217ENST00000566126 CBX2Q14781 532 aaPredicted RBP19.85■□□□□ 0.77
CLK3-217ENST00000566126 SLFN13Q68D06 897 aa19.85■□□□□ 0.77
CLK3-217ENST00000566126 STK11IPQ8N1F8 1099 aa19.85■□□□□ 0.77
CLK3-217ENST00000566126 MED19A0JLT2 244 aaPredicted RBP19.84■□□□□ 0.77
CLK3-217ENST00000566126 NKRFO15226 690 aaKnown RBP eCLIP19.84■□□□□ 0.77
CLK3-217ENST00000566126 LINC01565O15544 149 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 LGR5O75473 907 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 TRIM27P14373 513 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 STAT2P52630 851 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 PPP2R5BQ15173 497 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 TRIM71Q2Q1W2 868 aaKnown RBP19.84■□□□□ 0.77
CLK3-217ENST00000566126 WNT8BQ93098 351 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 CEP95Q96GE4 821 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 DNAJC2Q99543 621 aaKnown RBP19.84■□□□□ 0.77
CLK3-217ENST00000566126 SYNPO2Q9UMS6 1093 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 SLC4A4Q9Y6R1 1079 aa19.84■□□□□ 0.77
CLK3-217ENST00000566126 BAATQ14032 418 aaPredicted RBP19.83■□□□□ 0.77
CLK3-217ENST00000566126 ZNF618Q5T7W0 954 aa19.83■□□□□ 0.77
CLK3-217ENST00000566126 DBF4BQ8NFT6 615 aa19.83■□□□□ 0.77
CLK3-217ENST00000566126 KAT2BQ92831 832 aa19.83■□□□□ 0.77
CLK3-217ENST00000566126 DDRGK1Q96HY6 314 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms