RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 BAIAP2L1Q9UHR4 511 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 ARIH1Q9Y4X5 557 aaPredicted RBP3.2□□□□□ -1.9
CHD9-218ENST00000566029 STK36Q9NRP7 1315 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 LOXHD1Q8IVV2 1947 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 ZMYND10O75800 440 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 FAM153BP0C7A2 387 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 MRPS9P82933 396 aaKnown RBP3.2□□□□□ -1.9
CHD9-218ENST00000566029 FAM153CQ494X1 144 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 TBC1D1Q86TI0 1168 aaPredicted RBP3.2□□□□□ -1.9
CHD9-218ENST00000566029 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.2□□□□□ -1.92e-7■■■■■ 50.8
CHD9-218ENST00000566029 PAPOLBQ9NRJ5 636 aaKnown RBP3.2□□□□□ -1.9
CHD9-218ENST00000566029 HSFX1Q9UBD0 423 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 FAM153AQ9UHL3 310 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 COL15A1P39059 1388 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 TRAPPC3O43617 180 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 OAS1P00973 400 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 ALDH2P05091 517 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MXRA7P84157 204 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 DEUP1Q05D60 604 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MEA1Q16626 185 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 LZTS2Q9BRK4 669 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 FSD1Q9BTV5 496 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 TMEM165Q9HC07 324 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CDC42BPBQ9Y5S2 1711 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CPS1P31327 1500 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 DIAPH2O60879 1101 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 HSF2BPO75031 334 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 TRIM37O94972 964 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CCDC159P0C7I6 412 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SYKP43405 635 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 VPS41P49754 854 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 TAF11Q15544 211 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 HSP90AA4PQ58FG1 418 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SPATA20Q8TB22 786 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CENPTQ96BT3 561 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 HOMER2Q9NSB8 354 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SUN2Q9UH99 717 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SAR1BQ9Y6B6 198 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MYO3AQ8NEV4 1616 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PHF20L1A8MW92 1017 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 STXBP3O00186 592 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 STK10O94804 968 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 PTPREP23469 700 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CCDC102BQ68D86 513 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CYP26C1Q6V0L0 522 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MCM10Q7L590 875 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CHCHD4Q8N4Q1 142 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 ZCWPW1Q9H0M4 648 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PIDD1Q9HB75 910 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SNX12Q9UMY4 172 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MROH1Q8NDA8 1641 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 BACH1O14867 736 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 N4BP3O15049 544 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 ATP6V1G1O75348 118 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 OATP04181 439 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 RPSAP08865 295 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 PRLRP16471 622 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 EIF2S2P20042 333 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 MAP3K12Q12852 859 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 UBE4AQ14139 1066 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 BEND3Q5T5X7 828 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 LMBRD2Q68DH5 695 aaPredicted RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 ZNF589Q86UQ0 364 aaPredicted RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 USP6NLQ92738 828 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 TRAPPC9Q96Q05 1148 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MINK1Q8N4C8 1332 aaPredicted RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 PLSCR1O15162 318 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PDIA3P30101 505 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 ARID5AQ03989 594 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 IRGCQ6NXR0 463 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 WDR59Q6PJI9 974 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 EIF1ADQ8N9N8 165 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 JAKMIP2Q96AA8 810 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 IQCDQ96DY2 449 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 DACH1Q9UI36 760 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 TLK1Q9UKI8 766 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CEP131Q9UPN4 1083 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 ZNF609O15014 1411 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 IFIT3O14879 490 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 RRM1P23921 792 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 ERVK-9P63128 1117 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 EIF4A2Q14240 407 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 MAATS1Q7Z4T9 603 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PROSER2Q86WR7 435 aaPredicted RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 CHMP6Q96FZ7 201 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MAP3K14Q99558 947 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SYT15Q9BQS2 421 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SAMSN1Q9NSI8 373 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.19□□□□□ -1.94e-7■■■■□ 24.4
CHD9-218ENST00000566029 HPS5Q9UPZ3 1129 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 TMEM127O75204 238 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CSPG5O95196 566 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 GFAPP14136 432 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PPARDQ03181 441 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PPARAQ07869 468 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 GRSF1Q12849 480 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD9-218ENST00000566029 AFAP1Q8N556 730 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 AGAP3Q96P47 875 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 NDNQ99608 321 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 DDX23Q9BUQ8 820 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms