RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PCDHA11Q9Y5I1 949 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 TMEM82A0PJX8 343 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 ANKRD62A6NC57 917 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 FAM83GA6ND36 823 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 PABPC1P11940 636 aaKnown RBP5.8□□□□□ -1.48
LINC00561-201ENST00000565815 ATF3P18847 181 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 TPP2P29144 1249 aaPredicted RBP5.8□□□□□ -1.48
LINC00561-201ENST00000565815 GALK1P51570 392 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 GYS2P54840 703 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 LRRC59Q96AG4 307 aaKnown RBP5.8□□□□□ -1.48
LINC00561-201ENST00000565815 C19orf44Q9H6X5 657 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 SLC52A2Q9HAB3 445 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 CWC22Q9HCG8 908 aaKnown RBP5.8□□□□□ -1.48
LINC00561-201ENST00000565815 FHOD1Q9Y613 1164 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 LRP5O75197 1615 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 RPRD2Q5VT52 1461 aaKnown RBP5.8□□□□□ -1.48
LINC00561-201ENST00000565815 ADGRB3O60242 1522 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 GNAT3A8MTJ3 354 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 CYP26A1O43174 497 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 MSCO60682 206 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 SDSP20132 328 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 KCNJ6P48051 423 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 GFRA1P56159 465 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 LRP10Q7Z4F1 713 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 SLC7A14Q8TBB6 771 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 APPBP2Q92624 585 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 CDC6Q99741 560 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 GBP3Q9H0R5 595 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 NCOA5Q9HCD5 579 aaKnown RBP5.8□□□□□ -1.48
LINC00561-201ENST00000565815 SEMA3GQ9NS98 782 aa5.8□□□□□ -1.48
LINC00561-201ENST00000565815 CHD2O14647 1828 aaKnown RBP5.8□□□□□ -1.48
LINC00561-201ENST00000565815 ADAMTS4O75173 837 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 SNRPB2P08579 225 aaKnown RBP5.79□□□□□ -1.48
LINC00561-201ENST00000565815 RNF4P78317 190 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 RTP2Q5QGT7 225 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 NFXL1Q6ZNB6 911 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 USHBP1Q8N6Y0 703 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 SMARCC1Q92922 1105 aaPredicted RBP5.79□□□□□ -1.48
LINC00561-201ENST00000565815 SLC12A9Q9BXP2 914 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 SEMA6BQ9H3T3 888 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 FBLN5Q9UBX5 448 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 GTF2IRD1Q9UHL9 959 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 PTCH1Q13635 1447 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 PIK3C2BO00750 1634 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 LRP6O75581 1613 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 RASGRP1O95267 797 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 SPRED2Q7Z698 418 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 KIAA0907Q7Z7F0 614 aaPredicted RBP5.79□□□□□ -1.48
LINC00561-201ENST00000565815 LRRC47Q8N1G4 583 aaKnown RBP5.79□□□□□ -1.48
LINC00561-201ENST00000565815 SYTL5Q8TDW5 730 aaPredicted RBP5.79□□□□□ -1.48
LINC00561-201ENST00000565815 CLEC1BQ9P126 229 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 TCFL5Q9UL49 500 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 PTPN23Q9H3S7 1636 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 AFF2P51816 1311 aa5.79□□□□□ -1.48
LINC00561-201ENST00000565815 SKOR2Q2VWA4 1001 aaPredicted RBP5.78□□□□□ -1.48
LINC00561-201ENST00000565815 CYP27C1Q4G0S4 372 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 DUSP27Q5VZP5 1158 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 ARHGAP27Q6ZUM4 889 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 CPNE8Q86YQ8 564 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 NKX2-4Q9H2Z4 354 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 CEP152O94986 1710 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 TRBV23-1A0A0A0MS06 115 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 MSTNO14793 375 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 SYPP08247 313 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 INF2Q27J81 1249 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 CLEC16AQ2KHT3 1053 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 NSMFQ6X4W1 530 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 USP53Q70EK8 1073 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 FRS2Q8WU20 508 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 SCLYQ96I15 445 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 NDOR1Q9UHB4 597 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 TRPC5Q9UL62 973 aaPredicted RBP5.78□□□□□ -1.48
LINC00561-201ENST00000565815 MYOM3Q5VTT5 1437 aa5.78□□□□□ -1.48
LINC00561-201ENST00000565815 ESR1P03372 595 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 CYP7A1P22680 504 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 HSD3B2P26439 372 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 MSMPQ1L6U9 139 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 TMEM67Q5HYA8 995 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 KREMEN2Q8NCW0 462 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 RCC1LQ96I51 464 aaKnown RBP5.77□□□□□ -1.49
LINC00561-201ENST00000565815 CDADC1Q9BWV3 514 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 PPARGC1AQ9UBK2 798 aaKnown RBP5.77□□□□□ -1.49
LINC00561-201ENST00000565815 NOS1P29475 1434 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 TRAV20A0A0B4J274 112 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 NOP56O00567 594 aaKnown RBP5.77□□□□□ -1.49
LINC00561-201ENST00000565815 GSTM1P09488 218 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 PLS3P13797 630 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 PABPC4Q13310 644 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC00561-201ENST00000565815 GAB4Q2WGN9 574 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 PLEKHG4Q58EX7 1191 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 RALGPS1Q5JS13 557 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 TSPYL5Q86VY4 417 aaPredicted RBP5.77□□□□□ -1.49
LINC00561-201ENST00000565815 COPS5Q92905 334 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 DHRS4Q9BTZ2 278 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 PIM2Q9P1W9 311 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 DUSP13Q9UII6 198 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 RGS12O14924 1447 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 PITPNM2Q9BZ72 1349 aa5.77□□□□□ -1.49
LINC00561-201ENST00000565815 AMPD2Q01433 879 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 ABHD17CQ6PCB6 329 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms