RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 AMNQ9BXJ7 453 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 PPP1R12CQ9BZL4 782 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 TRPV6Q9H1D0 765 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 LY9Q9HBG7 655 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 EYSQ5T1H1 3165 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 UMODL1Q5DID0 1318 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 MROH7Q68CQ1 1323 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 ZEB2O60315 1214 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 TXNP10599 105 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 EIF2AK2P19525 551 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 HOXA13P31271 388 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 CYP2C18P33260 490 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 FPGSQ05932 587 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 BMP2KLQ5H9B9 411 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 NSUN6Q8TEA1 469 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 FAM161BQ96MY7 647 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 LRRC2Q9BYS8 371 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
NSMCE1-210ENST00000565626 PRC1O43663 620 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 B4GALT4O60513 344 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 CABYRO75952 493 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 CSF2RAP15509 400 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 RXRAP19793 462 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 HSD17B4P51659 736 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 PURAQ00577 322 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 NECTIN1Q15223 517 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 LY6KQ17RY6 165 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 ARHGEF16Q5VV41 709 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 MFSD5Q6N075 450 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 CCDC62Q6P9F0 684 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 C16orf59Q7L2K0 433 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 RAB11FIP4Q86YS3 637 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 RNPC3Q96LT9 517 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 PXMP2Q9NR77 195 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 MTMR10Q9NXD2 777 aa12.71□□□□□ -0.37
NSMCE1-210ENST00000565626 SH2B2O14492 632 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 ACRP10323 421 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 CPT1AP50416 773 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 IL31RAQ8NI17 732 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 AFG1LQ8WV93 481 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 IWS1Q96ST2 819 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.385e-6■■■□□ 16.3
NSMCE1-210ENST00000565626 ALDH8A1Q9H2A2 487 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 TRMT13Q9NUP7 481 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
NSMCE1-210ENST00000565626 PNMA6FA0A0J9YX94 578 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 A6NJR5 290 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 B4DLN1 442 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 NKRFO15226 690 aaKnown RBP eCLIP12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 NR3C2P08235 984 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 MCM5P33992 734 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 CCL23P55773 120 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 CHMP4BP1P59074 171 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 GHRHRQ02643 423 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 ARHGAP1Q07960 439 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 STXBP2Q15833 593 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 NBPF20Q3BBV1 942 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 FAM109BQ6ICB4 259 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 FCHSD1Q86WN1 690 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 GUCD1Q96NT3 240 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 PDCD2LQ9BRP1 358 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 NOC4LQ9BVI4 516 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 MAF1Q9H063 256 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 HIPK3Q9H422 1215 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
NSMCE1-210ENST00000565626 MYH6P13533 1939 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 RBAK-RBAKDNI3L0D1 243 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 SORBS3O60504 671 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 EIF3JO75822 258 aaKnown RBP12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 RGS20O76081 388 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 DDAH1O94760 285 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 CYP2C9P11712 490 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 FAM47CQ5HY64 1035 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 TMEM240Q5SV17 173 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 SRBD1Q8N5C6 995 aaKnown RBP12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 TCEANC2Q96MN5 208 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 WNT8AQ9H1J5 351 aa12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 DDX41Q9UJV9 622 aaKnown RBP12.68□□□□□ -0.38
NSMCE1-210ENST00000565626 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
NSMCE1-210ENST00000565626 hCG_1642624A0A1W2PR95 340 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms