RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 OSBPP22059 807 aa21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 PABPC4Q13310 644 aaKnown RBP eCLIP21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 MTFR1Q15390 333 aa21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 INF2Q27J81 1249 aa21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 SAMD1Q6SPF0 538 aaPredicted RBP21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 NEK8Q86SG6 692 aa21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 NAP1L4Q99733 375 aaKnown RBP21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 MAF1Q9H063 256 aa21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 MAP3K20Q9NYL2 800 aaKnown RBP21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 MEIS2O14770 477 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 ATP2A1O14983 1001 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 CUTAO60888 179 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 CTGFP29279 349 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 GRK4P32298 578 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 GADL1Q6ZQY3 521 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 MCF2L2Q86YR7 1114 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 SYAP1Q96A49 352 aaPredicted RBP21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 ATG4CQ96DT6 458 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 TMEM260Q9NX78 707 aa21.71■■□□□ 1.07
CSPG4P13-201ENST00000565545 SMCHD1A6NHR9 2005 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 LAD1O00515 517 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 ZNF174Q15697 407 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 UBE2SQ16763 222 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 MB21D1Q8N884 522 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 KRI1Q8N9T8 703 aaKnown RBP21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 REPS2Q8NFH8 660 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 TBCKQ8TEA7 893 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 FERMT2Q96AC1 680 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 PARK7Q99497 189 aaKnown RBP21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 AGTPBP1Q9UPW5 1226 aa21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 COL11A1P12107 1806 aaPredicted RBP21.7■■□□□ 1.06
CSPG4P13-201ENST00000565545 SPDYE3A6NKU9 549 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 GCOM1H8Y6P7 765 aaPredicted RBP21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 OPLAHO14841 1288 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 POLR2MP0CAP2 368 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 PTPREP23469 700 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 FCGRTP55899 365 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 ATP2C1P98194 919 aaPredicted RBP21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 GHRHRQ02643 423 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 TKFCQ3LXA3 575 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 TREML2Q5T2D2 321 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 USP17L6PQ6QN14 398 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 ZNF579Q8NAF0 562 aaKnown RBP21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 AGBL1Q96MI9 1066 aa21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 RAVER2Q9HCJ3 691 aaKnown RBP21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 SRPRBQ9Y5M8 271 aaKnown RBP21.69■■□□□ 1.06
CSPG4P13-201ENST00000565545 SPDYE16A6NNV3 312 aaPredicted RBP21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 CYP2C8P10632 490 aa21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 CMA1P23946 247 aa21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 MARCKSP29966 332 aaPredicted RBP21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 USP11P51784 963 aa21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 AXDND1Q5T1B0 1012 aaPredicted RBP21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 ARL6IP4Q66PJ3 421 aaKnown RBP21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 LBX2Q6XYB7 198 aa21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 CCAR1Q8IX12 1150 aaKnown RBP21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 CPXCR1Q8N123 301 aa21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 ANO3Q9BYT9 981 aa21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 RNF208Q9H0X6 261 aa21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 EHMT1Q9H9B1 1298 aa21.68■■□□□ 1.06
CSPG4P13-201ENST00000565545 MYH7BA7E2Y1 1941 aa21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 CCL5P13501 91 aa21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 GCFC2P16383 781 aaKnown RBP21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 MCM7P33993 719 aa21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 UBXN2AP68543 259 aa21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 IRX3P78415 501 aaPredicted RBP21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 PTGDRQ13258 359 aa21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 MOGSQ13724 837 aa21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 CHRDL2Q6WN34 429 aa21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 MRPS27Q92552 414 aaKnown RBP21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 FBXO2Q9UK22 296 aaPredicted RBP21.67■■□□□ 1.06
CSPG4P13-201ENST00000565545 A0A0G2JMZ2 1700 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 ADGRA2Q96PE1 1338 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 GJB1P08034 283 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 ALAS1P13196 640 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 HSD17B4P51659 736 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 LETM2Q2VYF4 491 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 PPP4R3AQ6IN85 833 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 MOXD1Q6UVY6 613 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 CCDC73Q6ZRK6 1079 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 TEX13BQ9BXU2 312 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 SLC45A1Q9Y2W3 748 aa21.66■■□□□ 1.06
CSPG4P13-201ENST00000565545 WNT7AO00755 349 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 CCNT1O60563 726 aaKnown RBP21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 CFBP00751 764 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 PRPHP41219 470 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 GJA8P48165 433 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 PRKCZQ05513 592 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 GPAT2Q6NUI2 795 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 CAVIN1Q6NZI2 390 aaKnown RBP21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 C4orf32Q8N8J7 132 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 FSIP1Q8NA03 581 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 GTF3C2Q8WUA4 911 aaPredicted RBP21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 CLEC4DQ8WXI8 215 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 HTATIP2Q9BUP3 242 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 DDX19AQ9NUU7 478 aaKnown RBP21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 ZNF214Q9UL59 606 aaPredicted RBP21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 RABGAP1Q9Y3P9 1069 aa21.65■■□□□ 1.06
CSPG4P13-201ENST00000565545 CEP290O15078 2479 aa21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 FAM237AA0A1B0GTK4 181 aa21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 BCRP11274 1271 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms