RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TMEM67Q5HYA8 995 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 CATIPQ7Z7H3 387 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 HOMER1Q86YM7 354 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 PPP1R13LQ8WUF5 828 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 PIBF1Q8WXW3 757 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 MYLIPQ8WY64 445 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 GUCD1Q96NT3 240 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 IWS1Q96ST2 819 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 MAF1Q9H063 256 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 ALDH8A1Q9H2A2 487 aaPredicted RBP7.46□□□□□ -1.22
TCF4-228ENST00000565393 MTIF3Q9H2K0 278 aaKnown RBP7.46□□□□□ -1.22
TCF4-228ENST00000565393 IL23AQ9NPF7 189 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 MAD2L2Q9UI95 211 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 MSRAQ9UJ68 235 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 NOD1Q9Y239 953 aa7.46□□□□□ -1.22
TCF4-228ENST00000565393 HTTP42858 3142 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 PALM3A6NDB9 673 aaPredicted RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 A6NJR5 290 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 ZBBXA8MT70 800 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 ZBTB5O15062 677 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 SGSM2O43147 1006 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 GH1P01241 217 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 NR3C2P08235 984 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 CYP2C9P11712 490 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 CASTP20810 708 aaKnown RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 EDNRBP24530 442 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 DNAJB2P25686 324 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 HOXA13P31271 388 aaPredicted RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 SEC23AQ15436 765 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 PSRC1Q6PGN9 363 aaPredicted RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 CASC1Q6TDU7 716 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 NFXL1Q6ZNB6 911 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 DEFB128Q7Z7B8 93 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 FCHSD1Q86WN1 690 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 AFG1LQ8WV93 481 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 TIFAQ96CG3 184 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 SCLYQ96I15 445 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 ZFP91Q96JP5 570 aaPredicted RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 PIGSQ96S52 555 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 FTOQ9C0B1 505 aaKnown RBP eCLIP7.45□□□□□ -1.22
TCF4-228ENST00000565393 TTYH1Q9H313 450 aaPredicted RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 ZNF576Q9H609 170 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 TRMT13Q9NUP7 481 aaKnown RBP7.45□□□□□ -1.22
TCF4-228ENST00000565393 COL20A1Q9P218 1284 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 MRVI1Q9Y6F6 885 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 UMODL1Q5DID0 1318 aa7.45□□□□□ -1.22
TCF4-228ENST00000565393 PNMA6FA0A0J9YX94 578 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 GCOM1H8Y6P7 765 aaPredicted RBP7.44□□□□□ -1.22
TCF4-228ENST00000565393 SORBS3O60504 671 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 ARIH2O95376 493 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 POLR2MP0CAP2 368 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 FOSL2P15408 326 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 PBX2P40425 430 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 LAMC2Q13753 1193 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 GRIN2CQ14957 1233 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 PTGISQ16647 500 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 CCDC62Q6P9F0 684 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 TMTC2Q8N394 836 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 SAMD3Q8N6K7 520 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 C7orf31Q8N865 590 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 MAFAQ8NHW3 353 aaPredicted RBP7.44□□□□□ -1.22
TCF4-228ENST00000565393 IGDCC4Q8TDY8 1250 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 PPM1EQ8WY54 764 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 HERVK_113Q902F9 699 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 MAP4K1Q92918 833 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 ALG1Q9BT22 464 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 NOC4LQ9BVI4 516 aaKnown RBP7.44□□□□□ -1.22
TCF4-228ENST00000565393 SLC28A3Q9HAS3 691 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 SENP2Q9HC62 589 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 PXMP2Q9NR77 195 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 MAP3K20Q9NYL2 800 aaKnown RBP7.44□□□□□ -1.22
TCF4-228ENST00000565393 DDX41Q9UJV9 622 aaKnown RBP7.44□□□□□ -1.22
TCF4-228ENST00000565393 RBM8AQ9Y5S9 174 aaKnown RBP7.44□□□□□ -1.22
TCF4-228ENST00000565393 SLC4A7Q9Y6M7 1214 aa7.44□□□□□ -1.22
TCF4-228ENST00000565393 GREB1LQ9C091 1923 aaPredicted RBP7.43□□□□□ -1.22
TCF4-228ENST00000565393 CCDC69A6NI79 296 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 PPP1R11O60927 126 aaPredicted RBP7.43□□□□□ -1.22
TCF4-228ENST00000565393 MMP3P08254 477 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 IQCF3P0C7M6 154 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 ACTN1P12814 892 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 IGFBP4P22692 258 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 HSD17B4P51659 736 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 PTPN11Q06124 597 aaPredicted RBP7.43□□□□□ -1.22
TCF4-228ENST00000565393 GRM4Q14833 912 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 DGKDQ16760 1214 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 NFRKBQ6P4R8 1299 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 KCNV1Q6PIU1 500 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 VSIG10LQ86VR7 867 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.43□□□□□ -1.22
TCF4-228ENST00000565393 CTCFLQ8NI51 663 aaPredicted RBP7.43□□□□□ -1.22
TCF4-228ENST00000565393 RRP36Q96EU6 259 aaKnown RBP7.43□□□□□ -1.22
TCF4-228ENST00000565393 PBX4Q9BYU1 374 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 RIOX1Q9H6W3 641 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 MLXIPQ9HAP2 919 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 RTEL1Q9NZ71 1219 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 CXXC1Q9P0U4 656 aaPredicted RBP7.43□□□□□ -1.22
TCF4-228ENST00000565393 TAF6LQ9Y6J9 622 aa7.43□□□□□ -1.22
TCF4-228ENST00000565393 MYH7P12883 1935 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms