RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
PALB2-203ENST00000565038 YBX1P67809 324 aaKnown RBP6.43□□□□□ -1.38
PALB2-203ENST00000565038 NTRK3Q16288 839 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 KCNT2Q6UVM3 1135 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 PLEKHO2Q8TD55 490 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 CHAMP1Q96JM3 812 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 SLC26A8Q96RN1 970 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 SLC38A3Q99624 504 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.43□□□□□ -1.38
PALB2-203ENST00000565038 USP35Q9P2H5 1018 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 C22orf46C9J442 243 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 MYO1BO43795 1136 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 PEX10O60683 326 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 NTRK1P04629 796 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 CYBBP04839 570 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 C8AP07357 584 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 TESK1Q15569 626 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 PLEKHN1Q494U1 663 aaPredicted RBP6.42□□□□□ -1.38
PALB2-203ENST00000565038 PAQR3Q6TCH7 311 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 CEP68Q76N32 757 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 TMC6Q7Z403 805 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 CABP7Q86V35 215 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 LILRB2Q8N423 598 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 EXOC2Q96KP1 924 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 PHF20Q9BVI0 1012 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 SIRT5Q9NXA8 310 aa6.42□□□□□ -1.38
PALB2-203ENST00000565038 DBR1Q9UK59 544 aaKnown RBP6.42□□□□□ -1.38
PALB2-203ENST00000565038 TRBV23-1A0A0A0MS06 115 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 ETV2O00321 342 aaPredicted RBP6.41□□□□□ -1.38
PALB2-203ENST00000565038 ABLIM1O14639 778 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 SRGAP3O43295 1099 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 MSCO60682 206 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 TMEM253P0C7T8 217 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 PRR5P85299 388 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 CBX2Q14781 532 aaPredicted RBP6.41□□□□□ -1.38
PALB2-203ENST00000565038 NR1I3Q14994 352 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 NFE2L2Q16236 605 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 DPH6Q7L8W6 267 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 NLRP10Q86W26 655 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 SCUBE1Q8IWY4 988 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 TRMT2BQ96GJ1 504 aaKnown RBP6.41□□□□□ -1.38
PALB2-203ENST00000565038 MRFAP1L1Q96HT8 127 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 IPO9Q96P70 1041 aaKnown RBP6.41□□□□□ -1.38
PALB2-203ENST00000565038 PIF1Q9H611 641 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 BCAS3Q9H6U6 928 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 CNTD2Q9H8S5 307 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 SIT1Q9Y3P8 196 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 NPFFR2Q9Y5X5 522 aa6.41□□□□□ -1.38
PALB2-203ENST00000565038 TEX51A0A1B0GUA7 166 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 KRT1P04264 644 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 C1QTNF9P0C862 333 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 MAPKAPK2P49137 400 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 DLG4P78352 724 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 TMEM62Q0P6H9 643 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 LSAMPQ13449 338 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 WWC2Q6AWC2 1192 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 ZC3H14Q6PJT7 736 aaKnown RBP6.4□□□□□ -1.38
PALB2-203ENST00000565038 DCAF4Q8WV16 495 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 TMEM169Q96HH4 297 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 GCM1Q9NP62 436 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 GPR27Q9NS67 375 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 CLDND1Q9NY35 253 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 MBD1Q9UIS9 605 aaPredicted RBP6.4□□□□□ -1.38
PALB2-203ENST00000565038 PLA2G2DQ9UNK4 145 aa6.4□□□□□ -1.38
PALB2-203ENST00000565038 HRKO00198 91 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 NFIBO00712 420 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 CDR1P51861 262 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 GTF2A2P52657 109 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 NCKAP1LP55160 1127 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 ZNF200P98182 395 aaPredicted RBP6.39□□□□□ -1.39
PALB2-203ENST00000565038 PKN1Q16512 942 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 OLFML2BQ68BL8 750 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 ATG14Q6ZNE5 492 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 PPP1R16BQ96T49 567 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 DHRS4Q9BTZ2 278 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 PPARGC1AQ9UBK2 798 aaKnown RBP6.39□□□□□ -1.39
PALB2-203ENST00000565038 TRAF6Q9Y4K3 522 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 ASXL2Q76L83 1435 aa6.39□□□□□ -1.39
PALB2-203ENST00000565038 SEMA7AO75326 666 aa6.38□□□□□ -1.39
PALB2-203ENST00000565038 RAP1GAPP47736 663 aa6.38□□□□□ -1.39
PALB2-203ENST00000565038 EPHB3P54753 998 aa6.38□□□□□ -1.39
PALB2-203ENST00000565038 SUMO1P63165 101 aaKnown RBP6.38□□□□□ -1.39
PALB2-203ENST00000565038 NETO2Q8NC67 525 aa6.38□□□□□ -1.39
PALB2-203ENST00000565038 THAP3Q8WTV1 239 aaPredicted RBP6.38□□□□□ -1.39
PALB2-203ENST00000565038 KANSL2Q9H9L4 492 aa6.38□□□□□ -1.39
PALB2-203ENST00000565038 MRPS23Q9Y3D9 190 aaKnown RBP6.38□□□□□ -1.39
PALB2-203ENST00000565038 PTCH2Q9Y6C5 1203 aa6.38□□□□□ -1.39
PALB2-203ENST00000565038 GLDCP23378 1020 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 RANGAP1P46060 587 aaPredicted RBP6.37□□□□□ -1.39
PALB2-203ENST00000565038 LONRF2Q1L5Z9 754 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 STYK1Q6J9G0 422 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 RSPO2Q6UXX9 243 aaPredicted RBP6.37□□□□□ -1.39
PALB2-203ENST00000565038 LDHDQ86WU2 507 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 Q8N1Y9 231 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 JMYQ8N9B5 988 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 MZB1Q8WU39 189 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 KISS1RQ969F8 398 aaPredicted RBP6.37□□□□□ -1.39
PALB2-203ENST00000565038 PEX11GQ96HA9 241 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 JAM3Q9BX67 310 aa6.37□□□□□ -1.39
PALB2-203ENST00000565038 NUDT5Q9UKK9 219 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms