RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 LINC01599Q8WXQ3 324 aa6.79□□□□□ -1.32
CDH1-207ENST00000564745 JMJD8Q96S16 334 aa6.79□□□□□ -1.32
CDH1-207ENST00000564745 ZFYVE21Q9BQ24 234 aa6.79□□□□□ -1.32
CDH1-207ENST00000564745 GULP1Q9UBP9 304 aa6.79□□□□□ -1.32
CDH1-207ENST00000564745 CCDC39Q9UFE4 941 aa6.79□□□□□ -1.32
CDH1-207ENST00000564745 MAPRE3Q9UPY8 281 aa6.79□□□□□ -1.32
CDH1-207ENST00000564745 SLC5A6Q9Y289 635 aa6.79□□□□□ -1.32
CDH1-207ENST00000564745 COQ6Q9Y2Z9 468 aa6.79□□□□□ -1.32
CDH1-207ENST00000564745 ADAMTS4O75173 837 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 EFEMP2O95967 443 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 CKMP06732 381 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 CFAP100Q494V2 611 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 PIK3R6Q5UE93 754 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 CDCA2Q69YH5 1023 aaPredicted RBP6.78□□□□□ -1.32
CDH1-207ENST00000564745 ZCCHC8Q6NZY4 707 aaKnown RBP6.78□□□□□ -1.32
CDH1-207ENST00000564745 INTS5Q6P9B9 1019 aaKnown RBP6.78□□□□□ -1.32
CDH1-207ENST00000564745 CYP2R1Q6VVX0 501 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 NLRP10Q86W26 655 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 DDX42Q86XP3 938 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDH1-207ENST00000564745 Q8N3U1 123 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 CHAMP1Q96JM3 812 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 CDIP1Q9H305 208 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 IPPKQ9H8X2 491 aa6.78□□□□□ -1.32
CDH1-207ENST00000564745 TRBV23OR9-2A0A075B6M9 112 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 GLRX3O76003 335 aaKnown RBP6.77□□□□□ -1.33
CDH1-207ENST00000564745 PRNPP04156 253 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 SOD2P04179 222 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 POU3F2P20265 443 aaPredicted RBP6.77□□□□□ -1.33
CDH1-207ENST00000564745 ENDOUP21128 410 aaKnown RBP6.77□□□□□ -1.33
CDH1-207ENST00000564745 FPR2P25090 351 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 SOX5P35711 763 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 CD97P48960 835 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 NFKB2Q00653 900 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 PAK1Q13153 545 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 CT47A1Q5JQC4 288 aaPredicted RBP6.77□□□□□ -1.33
CDH1-207ENST00000564745 ANGEL2Q5VTE6 544 aaKnown RBP6.77□□□□□ -1.33
CDH1-207ENST00000564745 HLA-DQA1Q5Y7H0 255 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 SLCO6A1Q86UG4 719 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 DTX1Q86Y01 620 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 ZC3H7AQ8IWR0 971 aaKnown RBP6.77□□□□□ -1.33
CDH1-207ENST00000564745 STK11IPQ8N1F8 1099 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 AFAP1L2Q8N4X5 818 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 IGSF22Q8N9C0 903 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 STAG1Q8WVM7 1258 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 ALPK1Q96QP1 1244 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 JAM3Q9BX67 310 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 TMX1Q9H3N1 280 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 LMCD1Q9NZU5 365 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 SAMD15Q9P1V8 674 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
CDH1-207ENST00000564745 TIMM13Q9Y5L4 95 aaPredicted RBP6.77□□□□□ -1.33
CDH1-207ENST00000564745 NOTOA8MTQ0 251 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 NPHS1O60500 1241 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 SPINK2P20155 84 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 HK2P52789 917 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 STRN3Q13033 797 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 LSAMPQ13449 338 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 KIZQ2M2Z5 673 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 LHFPL2Q6ZUX7 228 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 TEX2Q8IWB9 1127 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 PPM1KQ8N3J5 372 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 PRPF38AQ8NAV1 312 aaKnown RBP6.76□□□□□ -1.33
CDH1-207ENST00000564745 KCNJ15Q99712 375 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 ALG1Q9BT22 464 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 PAK6Q9NQU5 681 aaPredicted RBP6.76□□□□□ -1.33
CDH1-207ENST00000564745 CLDND1Q9NY35 253 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 TNFRSF10DQ9UBN6 386 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 ATP8A1Q9Y2Q0 1164 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 RWDD3Q9Y3V2 267 aa6.76□□□□□ -1.33
CDH1-207ENST00000564745 ZNF891A8MT65 544 aaPredicted RBP6.75□□□□□ -1.33
CDH1-207ENST00000564745 M0R2C6 588 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 RAB11FIP3O75154 756 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 HMGB1P09429 215 aaKnown RBP6.75□□□□□ -1.33
CDH1-207ENST00000564745 MSL3P1P0C860 447 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 PYGMP11217 842 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 DNM2P50570 870 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 RTP1P59025 263 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 ERVFC1P60507 584 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 RPL11P62913 178 aaKnown RBP6.75□□□□□ -1.33
CDH1-207ENST00000564745 HSF5Q4G112 596 aaPredicted RBP6.75□□□□□ -1.33
CDH1-207ENST00000564745 CEP128Q6ZU80 1094 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 VSIG10LQ86VR7 867 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 NXPE1Q8N323 547 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 FLCNQ8NFG4 579 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 PLCD4Q9BRC7 762 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 MARCH2Q9P0N8 246 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 IMPACTQ9P2X3 320 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 TMEM59LQ9UK28 342 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 ADAMTS6Q9UKP5 1117 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 CBLCQ9ULV8 474 aa6.75□□□□□ -1.33
CDH1-207ENST00000564745 CCDC66A2RUB6 948 aa6.74□□□□□ -1.33
CDH1-207ENST00000564745 WTIPA6NIX2 430 aaPredicted RBP6.74□□□□□ -1.33
CDH1-207ENST00000564745 KIAA1324LA8MWY0 1029 aaPredicted RBP6.74□□□□□ -1.33
CDH1-207ENST00000564745 MYO1BO43795 1136 aa6.74□□□□□ -1.33
CDH1-207ENST00000564745 EYA4O95677 639 aa6.74□□□□□ -1.33
CDH1-207ENST00000564745 FUCA1P04066 466 aa6.74□□□□□ -1.33
CDH1-207ENST00000564745 CDK11BP21127 795 aaKnown RBP6.74□□□□□ -1.33
CDH1-207ENST00000564745 GRK2P25098 689 aa6.74□□□□□ -1.33
CDH1-207ENST00000564745 TACR1P25103 407 aa6.74□□□□□ -1.33
CDH1-207ENST00000564745 GRK3P35626 688 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms