RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 PHLPP1O60346 1717 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 DOT1LQ8TEK3 1739 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 ECM29Q5VYK3 1845 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 SMCO2A6NFE2 343 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 STXBP3O00186 592 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 TRIM66O15016 1216 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 POLR3GO15318 223 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 CCNT1O60563 726 aaKnown RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 EPS15P42566 896 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 AARSP49588 968 aaKnown RBP eCLIP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 ADCY7P51828 1080 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 USP14P54578 494 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 ST5P78524 1137 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 SLC20A2Q08357 652 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 PPFIA1Q13136 1202 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 NNTQ13423 1086 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 CALCRLQ16602 461 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 SLC9C1Q4G0N8 1177 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 HSP90AA4PQ58FG1 418 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 BEND6Q5SZJ8 279 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 HAUS3Q68CZ6 603 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 C16orf86Q6ZW13 317 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 USP49Q70CQ1 688 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 CACNA2D4Q7Z3S7 1137 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC65Q8IXS2 484 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 C4orf32Q8N8J7 132 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 NEK11Q8NG66 645 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 ZNF507Q8TCN5 953 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 LMBR1Q8WVP7 490 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 RPGRQ92834 1020 aaKnown RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 RBM17Q96I25 401 aaKnown RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 CNOT6LQ96LI5 555 aaKnown RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC17Q96LX7 622 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 SLF1Q9BQI6 1058 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 MXD3Q9BW11 206 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 TRIM9Q9C026 710 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 BLZF1Q9H2G9 400 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 MRPL44Q9H9J2 332 aaKnown RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 NHEJ1Q9H9Q4 299 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 LRWD1Q9UFC0 647 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 PUF60Q9UHX1 559 aaKnown RBP8.48□□□□□ -1.05
ATXN3-249ENST00000564606 MAD2L2Q9UI95 211 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 PLAGL2Q9UPG8 496 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 HYOU1Q9Y4L1 999 aa8.48□□□□□ -1.05
ATXN3-249ENST00000564606 C10orf71Q711Q0 1435 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 A0A087X0B3 334 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 TTC26A0AVF1 554 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 GOLGA8KD6RF30 607 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 M0R2N6 131 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 AKR1B10O60218 316 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-249ENST00000564606 TBC1D12O60347 775 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 BBOX1O75936 387 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 HLA-DOAP06340 250 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC172P0C7W6 258 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 IDEP14735 1019 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 RFC4P35249 363 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 FKBP3Q00688 224 aaKnown RBP8.47□□□□□ -1.05
ATXN3-249ENST00000564606 ITPK1Q13572 414 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 MCM6Q14566 821 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 CASP8Q14790 479 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 NPY5RQ15761 445 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 PPP2R5EQ16537 467 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 ZSCAN26Q16670 478 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 TMEM132AQ24JP5 1023 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 INF2Q27J81 1249 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC96Q2M329 555 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 LETM2Q2VYF4 491 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 FAM47AQ5JRC9 791 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 ALS2CLQ60I27 953 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 PPP4R3AQ6IN85 833 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 CENPPQ6IPU0 288 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 TTI2Q6NXR4 508 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 EMBQ6PCB8 327 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 ADGRA1Q86SQ6 560 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 SLFN12Q8IYM2 578 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 MMGT1Q8N4V1 131 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 EIF1ADQ8N9N8 165 aaKnown RBP8.47□□□□□ -1.05
ATXN3-249ENST00000564606 AFAP1L1Q8TED9 768 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 LARP4BQ92615 738 aaKnown RBP8.47□□□□□ -1.05
ATXN3-249ENST00000564606 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 NOX5Q96PH1 765 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 EYA3Q99504 573 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 IFIH1Q9BYX4 1025 aaKnown RBP8.47□□□□□ -1.05
ATXN3-249ENST00000564606 JADE2Q9NQC1 790 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 ADAM21Q9UKJ8 722 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 TACC3Q9Y6A5 838 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 LAMB1P07942 1786 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 ATP8B3O60423 1300 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC88AQ3V6T2 1871 aa8.47□□□□□ -1.05
ATXN3-249ENST00000564606 KIAA1551Q9HCM1 1747 aa8.46□□□□□ -1.05
ATXN3-249ENST00000564606 GPR75-ASB3A0A0A6YYF3 556 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 GRID2IPA4D2P6 1211 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 CES2O00748 559 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 CAPN2P17655 700 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 PLCG1P19174 1290 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 RPL13P26373 211 aaKnown RBP8.46□□□□□ -1.06
ATXN3-249ENST00000564606 TNNT3P45378 269 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms